Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDH12P55289 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDH12P55289 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.58□□□□□ -0.24
CDH12P55289 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDH12P55289 AC027612.1-201ENST00000445234 2395 ntBASIC13.58□□□□□ -0.24
CDH12P55289 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDH12P55289 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDH12P55289 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CDH12P55289 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.58□□□□□ -0.24
CDH12P55289 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDH12P55289 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDH12P55289 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDH12P55289 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.57□□□□□ -0.24
CDH12P55289 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.57□□□□□ -0.24
CDH12P55289 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH12P55289 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH12P55289 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH12P55289 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CDH12P55289 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CDH12P55289 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH12P55289 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CDH12P55289 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.57□□□□□ -0.24
CDH12P55289 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH12P55289 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH12P55289 AC139712.1-201ENST00000378256 1875 ntBASIC13.57□□□□□ -0.24
CDH12P55289 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH12P55289 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDH12P55289 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.57□□□□□ -0.24
CDH12P55289 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDH12P55289 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CDH12P55289 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH12P55289 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.57□□□□□ -0.24
CDH12P55289 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CDH12P55289 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH12P55289 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH12P55289 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH12P55289 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CDH12P55289 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.57□□□□□ -0.24
CDH12P55289 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDH12P55289 DGCR5-201ENST00000399539 862 ntBASIC13.57□□□□□ -0.24
CDH12P55289 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDH12P55289 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDH12P55289 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.57□□□□□ -0.24
CDH12P55289 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.57□□□□□ -0.24
CDH12P55289 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.57□□□□□ -0.24
CDH12P55289 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDH12P55289 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CDH12P55289 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
CDH12P55289 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDH12P55289 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH12P55289 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH12P55289 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.57□□□□□ -0.24
CDH12P55289 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH12P55289 CLUHP2-201ENST00000426660 1303 ntBASIC13.57□□□□□ -0.24
CDH12P55289 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH12P55289 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CDH12P55289 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
CDH12P55289 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH12P55289 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH12P55289 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH12P55289 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDH12P55289 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH12P55289 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.56□□□□□ -0.24
CDH12P55289 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.56□□□□□ -0.24
CDH12P55289 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CDH12P55289 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH12P55289 AC072061.1-201ENST00000569710 2234 ntBASIC13.56□□□□□ -0.24
CDH12P55289 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.56□□□□□ -0.24
CDH12P55289 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CDH12P55289 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH12P55289 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.56□□□□□ -0.24
CDH12P55289 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
CDH12P55289 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH12P55289 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH12P55289 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CDH12P55289 KHSRPP1-201ENST00000427983 1768 ntBASIC13.56□□□□□ -0.24
CDH12P55289 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH12P55289 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH12P55289 AL365181.3-201ENST00000605886 3222 ntBASIC13.56□□□□□ -0.24
CDH12P55289 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH12P55289 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH12P55289 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CDH12P55289 BAATP1-201ENST00000412284 1225 ntBASIC13.56□□□□□ -0.24
CDH12P55289 AC245100.3-201ENST00000441281 285 ntBASIC13.56□□□□□ -0.24
CDH12P55289 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
CDH12P55289 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.56□□□□□ -0.24
CDH12P55289 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.56□□□□□ -0.24
CDH12P55289 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CDH12P55289 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.56□□□□□ -0.24
CDH12P55289 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.56□□□□□ -0.24
CDH12P55289 SORD2P-201ENST00000558556 1069 ntBASIC13.56□□□□□ -0.24
CDH12P55289 AC103988.2-201ENST00000561804 725 ntBASIC13.56□□□□□ -0.24
CDH12P55289 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.56□□□□□ -0.24
CDH12P55289 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.56□□□□□ -0.24
CDH12P55289 AC145423.3-201ENST00000615987 467 ntBASIC13.56□□□□□ -0.24
CDH12P55289 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CDH12P55289 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH12P55289 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH12P55289 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.56□□□□□ -0.24
CDH12P55289 AC134312.5-201ENST00000568031 1313 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms