Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AL162726.2-201ENST00000438986 1017 ntBASIC13.28□□□□□ -0.28
CENPAP49450 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 ELK1P1-201ENST00000485699 580 ntBASIC13.28□□□□□ -0.28
CENPAP49450 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.28□□□□□ -0.28
CENPAP49450 AP001063.1-201ENST00000568332 529 ntBASIC13.28□□□□□ -0.28
CENPAP49450 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.28□□□□□ -0.28
CENPAP49450 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.28□□□□□ -0.28
CENPAP49450 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
CENPAP49450 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.28□□□□□ -0.28
CENPAP49450 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.28□□□□□ -0.28
CENPAP49450 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
CENPAP49450 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.28□□□□□ -0.28
CENPAP49450 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.28□□□□□ -0.28
CENPAP49450 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.28□□□□□ -0.28
CENPAP49450 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CENPAP49450 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
CENPAP49450 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CENPAP49450 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 TCAM1P-207ENST00000485295 1537 ntBASIC13.28□□□□□ -0.28
CENPAP49450 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.28□□□□□ -0.28
CENPAP49450 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CENPAP49450 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CENPAP49450 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC13.27□□□□□ -0.28
CENPAP49450 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.27□□□□□ -0.28
CENPAP49450 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC13.27□□□□□ -0.28
CENPAP49450 AC090505.1-201ENST00000430515 1834 ntBASIC13.27□□□□□ -0.28
CENPAP49450 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CENPAP49450 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CENPAP49450 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
CENPAP49450 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CENPAP49450 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CENPAP49450 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CENPAP49450 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CENPAP49450 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CENPAP49450 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CENPAP49450 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC13.27□□□□□ -0.28
CENPAP49450 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
CENPAP49450 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CENPAP49450 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.27□□□□□ -0.28
CENPAP49450 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CENPAP49450 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
CENPAP49450 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CENPAP49450 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CENPAP49450 AL928921.2-201ENST00000641325 2442 ntBASIC13.27□□□□□ -0.29
CENPAP49450 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CENPAP49450 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CENPAP49450 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CENPAP49450 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CENPAP49450 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CENPAP49450 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.27□□□□□ -0.29
CENPAP49450 AC236430.1-201ENST00000402231 743 ntBASIC13.27□□□□□ -0.29
CENPAP49450 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.27□□□□□ -0.29
CENPAP49450 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
CENPAP49450 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CENPAP49450 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.27□□□□□ -0.29
CENPAP49450 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CENPAP49450 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.27□□□□□ -0.29
CENPAP49450 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CENPAP49450 CTBP2P3-201ENST00000585629 1255 ntBASIC13.27□□□□□ -0.29
CENPAP49450 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.27□□□□□ -0.29
CENPAP49450 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CENPAP49450 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CENPAP49450 MRPL37P1-201ENST00000592451 1337 ntBASIC13.27□□□□□ -0.29
CENPAP49450 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CENPAP49450 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.27□□□□□ -0.29
CENPAP49450 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CENPAP49450 Z82170.1-201ENST00000625081 3192 ntBASIC13.27□□□□□ -0.29
CENPAP49450 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CENPAP49450 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CENPAP49450 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CENPAP49450 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.27□□□□□ -0.29
CENPAP49450 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CENPAP49450 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CENPAP49450 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CENPAP49450 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CENPAP49450 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CENPAP49450 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CENPAP49450 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CENPAP49450 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CENPAP49450 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CENPAP49450 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CENPAP49450 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CENPAP49450 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
CENPAP49450 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms