Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RN7SL530P-201ENST00000485097 298 ntBASIC14.81□□□□□ -0.04
SLC6A4P31645 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.81□□□□□ -0.04
SLC6A4P31645 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.81□□□□□ -0.04
SLC6A4P31645 AC007718.1-201ENST00000621078 280 ntBASIC14.81□□□□□ -0.04
SLC6A4P31645 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A4P31645 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A4P31645 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A4P31645 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
SLC6A4P31645 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
SLC6A4P31645 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A4P31645 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A4P31645 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A4P31645 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A4P31645 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SLC6A4P31645 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SLC6A4P31645 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A4P31645 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC6A4P31645 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
SLC6A4P31645 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A4P31645 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A4P31645 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A4P31645 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A4P31645 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SLC6A4P31645 BRD7P5-201ENST00000299197 1822 ntBASIC14.8□□□□□ -0.04
SLC6A4P31645 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A4P31645 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC6A4P31645 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A4P31645 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SLC6A4P31645 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A4P31645 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A4P31645 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A4P31645 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A4P31645 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A4P31645 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A4P31645 AC091046.1-201ENST00000331871 207 ntBASIC14.8□□□□□ -0.04
SLC6A4P31645 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC6A4P31645 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
SLC6A4P31645 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A4P31645 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A4P31645 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.8□□□□□ -0.04
SLC6A4P31645 AC026320.2-201ENST00000434379 478 ntBASIC14.8□□□□□ -0.04
SLC6A4P31645 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SLC6A4P31645 RN7SL258P-201ENST00000478664 300 ntBASIC14.8□□□□□ -0.04
SLC6A4P31645 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A4P31645 MIR3907-201ENST00000579424 151 ntBASIC14.8□□□□□ -0.04
SLC6A4P31645 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.8□□□□□ -0.04
SLC6A4P31645 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC6A4P31645 LINC01783-202ENST00000614408 828 ntBASIC14.8□□□□□ -0.04
SLC6A4P31645 BX284668.2-205ENST00000619677 828 ntBASIC14.8□□□□□ -0.04
SLC6A4P31645 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SLC6A4P31645 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SLC6A4P31645 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A4P31645 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A4P31645 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A4P31645 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SLC6A4P31645 TBC1D3J-201ENST00000620719 1426 ntBASIC14.8□□□□□ -0.04
SLC6A4P31645 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
SLC6A4P31645 AL161772.1-201ENST00000610494 4412 ntBASIC14.8□□□□□ -0.04
SLC6A4P31645 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A4P31645 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SLC6A4P31645 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SLC6A4P31645 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.8□□□□□ -0.04
SLC6A4P31645 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A4P31645 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.8□□□□□ -0.04
SLC6A4P31645 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A4P31645 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A4P31645 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A4P31645 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A4P31645 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A4P31645 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC6A4P31645 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A4P31645 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC6A4P31645 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A4P31645 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
SLC6A4P31645 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A4P31645 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A4P31645 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A4P31645 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A4P31645 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC6A4P31645 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A4P31645 BANF1P3-201ENST00000412556 261 ntBASIC14.79□□□□□ -0.04
SLC6A4P31645 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.79□□□□□ -0.04
SLC6A4P31645 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A4P31645 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A4P31645 AC234782.1-201ENST00000451950 919 ntBASIC14.79□□□□□ -0.04
SLC6A4P31645 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.79□□□□□ -0.04
SLC6A4P31645 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC6A4P31645 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC6A4P31645 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC6A4P31645 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.79□□□□□ -0.04
SLC6A4P31645 AC008723.1-201ENST00000506922 207 ntBASIC14.79□□□□□ -0.04
SLC6A4P31645 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A4P31645 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC6A4P31645 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.79□□□□□ -0.04
SLC6A4P31645 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC6A4P31645 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC6A4P31645 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC6A4P31645 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.79□□□□□ -0.04
SLC6A4P31645 CAP2P1-201ENST00000557743 1390 ntBASIC14.79□□□□□ -0.04
SLC6A4P31645 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms