Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
CHMLP26374 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHMLP26374 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMLP26374 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMLP26374 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMLP26374 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMLP26374 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMLP26374 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMLP26374 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHMLP26374 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMLP26374 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMLP26374 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMLP26374 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMLP26374 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CHMLP26374 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.4■□□□□ 0.38
CHMLP26374 TUBB8P8-201ENST00000458717 1058 ntBASIC17.4■□□□□ 0.38
CHMLP26374 HLA-J-204ENST00000495278 958 ntBASIC17.4■□□□□ 0.38
CHMLP26374 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMLP26374 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMLP26374 AL583810.1-201ENST00000553344 1045 ntBASIC17.4■□□□□ 0.38
CHMLP26374 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHMLP26374 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMLP26374 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMLP26374 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
CHMLP26374 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMLP26374 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMLP26374 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMLP26374 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMLP26374 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMLP26374 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMLP26374 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMLP26374 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC17.4■□□□□ 0.38
CHMLP26374 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMLP26374 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMLP26374 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMLP26374 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHMLP26374 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHMLP26374 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMLP26374 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMLP26374 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMLP26374 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMLP26374 KRT8P29-201ENST00000420409 1371 ntBASIC17.4■□□□□ 0.38
CHMLP26374 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CHMLP26374 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHMLP26374 USP39-207ENST00000450066 2086 ntTSL 2 BASIC17.4■□□□□ 0.38
CHMLP26374 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.39■□□□□ 0.38
CHMLP26374 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHMLP26374 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHMLP26374 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHMLP26374 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHMLP26374 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC17.39■□□□□ 0.38
CHMLP26374 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
CHMLP26374 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMLP26374 USP39-220ENST00000613444 2161 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMLP26374 AC007952.5-201ENST00000572818 1486 ntBASIC17.39■□□□□ 0.37
CHMLP26374 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMLP26374 GOLGA8EP-201ENST00000530246 1959 ntBASIC17.39■□□□□ 0.37
CHMLP26374 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMLP26374 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMLP26374 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CHMLP26374 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMLP26374 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHMLP26374 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMLP26374 OR8S1-201ENST00000310194 1080 ntBASIC17.39■□□□□ 0.37
CHMLP26374 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHMLP26374 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMLP26374 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMLP26374 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHMLP26374 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMLP26374 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.39■□□□□ 0.37
CHMLP26374 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHMLP26374 KRT18P15-201ENST00000458108 1291 ntBASIC17.39■□□□□ 0.37
CHMLP26374 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMLP26374 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.39■□□□□ 0.37
CHMLP26374 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.39■□□□□ 0.37
CHMLP26374 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.39■□□□□ 0.37
CHMLP26374 BNIP3P13-201ENST00000599968 566 ntBASIC17.39■□□□□ 0.37
CHMLP26374 AP000346.4-201ENST00000614827 381 ntBASIC17.39■□□□□ 0.37
CHMLP26374 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.39■□□□□ 0.37
CHMLP26374 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMLP26374 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMLP26374 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CHMLP26374 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMLP26374 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHMLP26374 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC17.39■□□□□ 0.37
CHMLP26374 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMLP26374 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMLP26374 FLJ16779-201ENST00000612722 7638 ntBASIC17.39■□□□□ 0.37
CHMLP26374 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMLP26374 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHMLP26374 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMLP26374 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMLP26374 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMLP26374 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC17.39■□□□□ 0.37
CHMLP26374 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMLP26374 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHMLP26374 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CHMLP26374 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC17.39■□□□□ 0.37
CHMLP26374 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
CHMLP26374 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms