Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.12□□□□□ -0.31
PPP3CBP16298 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
PPP3CBP16298 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
PPP3CBP16298 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
PPP3CBP16298 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.12□□□□□ -0.31
PPP3CBP16298 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
PPP3CBP16298 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
PPP3CBP16298 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
PPP3CBP16298 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
PPP3CBP16298 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.12□□□□□ -0.31
PPP3CBP16298 AC026434.2-201ENST00000506094 1078 ntBASIC13.12□□□□□ -0.31
PPP3CBP16298 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.12□□□□□ -0.31
PPP3CBP16298 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.12□□□□□ -0.31
PPP3CBP16298 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.12□□□□□ -0.31
PPP3CBP16298 AC007663.3-201ENST00000609632 465 ntBASIC13.12□□□□□ -0.31
PPP3CBP16298 AL139099.5-201ENST00000635274 300 ntBASIC13.12□□□□□ -0.31
PPP3CBP16298 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
PPP3CBP16298 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.12□□□□□ -0.31
PPP3CBP16298 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
PPP3CBP16298 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
PPP3CBP16298 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.12□□□□□ -0.31
PPP3CBP16298 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
PPP3CBP16298 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
PPP3CBP16298 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.12□□□□□ -0.31
PPP3CBP16298 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
PPP3CBP16298 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP3CBP16298 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP3CBP16298 REXO1L4P-201ENST00000605109 1937 ntBASIC13.11□□□□□ -0.31
PPP3CBP16298 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP3CBP16298 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.11□□□□□ -0.31
PPP3CBP16298 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
PPP3CBP16298 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PPP3CBP16298 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP3CBP16298 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
PPP3CBP16298 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
PPP3CBP16298 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
PPP3CBP16298 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
PPP3CBP16298 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP3CBP16298 WASH3P-207ENST00000560956 1394 ntBASIC13.11□□□□□ -0.31
PPP3CBP16298 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
PPP3CBP16298 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.11□□□□□ -0.31
PPP3CBP16298 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.11□□□□□ -0.31
PPP3CBP16298 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
PPP3CBP16298 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP3CBP16298 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP3CBP16298 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.11□□□□□ -0.31
PPP3CBP16298 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP3CBP16298 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.11□□□□□ -0.31
PPP3CBP16298 AC004945.1-201ENST00000416738 983 ntBASIC13.11□□□□□ -0.31
PPP3CBP16298 AL008707.1-201ENST00000422498 534 ntBASIC13.11□□□□□ -0.31
PPP3CBP16298 AKR7A2P1-201ENST00000460134 915 ntBASIC13.11□□□□□ -0.31
PPP3CBP16298 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PPP3CBP16298 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP3CBP16298 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.11□□□□□ -0.31
PPP3CBP16298 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.11□□□□□ -0.31
PPP3CBP16298 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP3CBP16298 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP3CBP16298 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP3CBP16298 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP3CBP16298 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP3CBP16298 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP3CBP16298 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP3CBP16298 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PPP3CBP16298 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
PPP3CBP16298 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP3CBP16298 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
PPP3CBP16298 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP3CBP16298 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP3CBP16298 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP3CBP16298 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
PPP3CBP16298 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
PPP3CBP16298 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.11□□□□□ -0.31
PPP3CBP16298 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.1□□□□□ -0.31
PPP3CBP16298 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms