Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 PPT1-215ENST00000641471 2368 ntBASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 AC018442.1-201ENST00000421439 2061 ntBASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.99■□□□□ 0.63
CSB-PGBD3P0DP91 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 CICP6-201ENST00000457191 2729 ntBASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 AC005740.1-201ENST00000515639 522 ntBASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 SORD2P-201ENST00000558556 1069 ntBASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 EIF5AP2-201ENST00000585668 1047 ntBASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 AC008972.2-201ENST00000606587 494 ntBASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 AC006483.2-201ENST00000609813 515 ntBASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 CCT8L1P-201ENST00000465400 1674 ntBASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSB-PGBD3P0DP91 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 SURF4-203ENST00000371991 715 ntTSL 3 BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 AL161932.2-201ENST00000435436 679 ntBASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 AC063952.3-201ENST00000467756 308 ntBASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 IGHV1-12-201ENST00000518307 205 ntBASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 USB1-205ENST00000561743 1135 ntTSL 3 BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 SNORD3B-1-201ENST00000577988 758 ntBASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 AC006548.2-201ENST00000605217 529 ntBASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 AL109954.1-202ENST00000564051 2148 ntBASIC18.97■□□□□ 0.63
CSB-PGBD3P0DP91 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 MSANTD2P1-201ENST00000445341 1368 ntBASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.96■□□□□ 0.63
CSB-PGBD3P0DP91 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms