Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHGBP05060 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHGBP05060 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHGBP05060 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHGBP05060 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHGBP05060 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHGBP05060 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHGBP05060 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC17.3■□□□□ 0.36
CHGBP05060 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHGBP05060 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHGBP05060 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHGBP05060 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC17.3■□□□□ 0.36
CHGBP05060 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CHGBP05060 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC17.29■□□□□ 0.36
CHGBP05060 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHGBP05060 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHGBP05060 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHGBP05060 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHGBP05060 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CHGBP05060 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHGBP05060 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHGBP05060 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHGBP05060 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHGBP05060 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHGBP05060 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHGBP05060 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC17.29■□□□□ 0.36
CHGBP05060 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHGBP05060 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17.29■□□□□ 0.36
CHGBP05060 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.29■□□□□ 0.36
CHGBP05060 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.29■□□□□ 0.36
CHGBP05060 AC090857.1-201ENST00000527400 390 ntBASIC17.29■□□□□ 0.36
CHGBP05060 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.29■□□□□ 0.36
CHGBP05060 AC093752.3-201ENST00000567343 901 ntBASIC17.29■□□□□ 0.36
CHGBP05060 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.29■□□□□ 0.36
CHGBP05060 HPN-206ENST00000597419 1212 ntTSL 5 BASIC17.29■□□□□ 0.36
CHGBP05060 AL606495.2-201ENST00000605867 535 ntBASIC17.29■□□□□ 0.36
CHGBP05060 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHGBP05060 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHGBP05060 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHGBP05060 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CHGBP05060 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHGBP05060 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHGBP05060 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHGBP05060 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHGBP05060 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHGBP05060 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.29■□□□□ 0.36
CHGBP05060 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHGBP05060 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC17.29■□□□□ 0.36
CHGBP05060 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHGBP05060 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CHGBP05060 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHGBP05060 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC17.29■□□□□ 0.36
CHGBP05060 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHGBP05060 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.29■□□□□ 0.36
CHGBP05060 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHGBP05060 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHGBP05060 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.28■□□□□ 0.36
CHGBP05060 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHGBP05060 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHGBP05060 DDC-213ENST00000617822 1809 ntTSL 3 BASIC17.28■□□□□ 0.36
CHGBP05060 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHGBP05060 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CHGBP05060 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHGBP05060 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC17.28■□□□□ 0.36
CHGBP05060 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CHGBP05060 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CHGBP05060 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHGBP05060 AGAP10P-201ENST00000454844 2418 ntBASIC17.28■□□□□ 0.36
CHGBP05060 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHGBP05060 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHGBP05060 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHGBP05060 USP39-220ENST00000613444 2161 ntTSL 2 BASIC17.28■□□□□ 0.36
CHGBP05060 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHGBP05060 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC17.28■□□□□ 0.36
CHGBP05060 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC17.28■□□□□ 0.36
CHGBP05060 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHGBP05060 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CHGBP05060 AC073869.1-201ENST00000415574 2762 ntBASIC17.28■□□□□ 0.36
CHGBP05060 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHGBP05060 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHGBP05060 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.28■□□□□ 0.36
CHGBP05060 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHGBP05060 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.28■□□□□ 0.36
CHGBP05060 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.28■□□□□ 0.36
CHGBP05060 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.28■□□□□ 0.36
CHGBP05060 Z97180.1-201ENST00000445173 988 ntBASIC17.28■□□□□ 0.36
CHGBP05060 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC17.28■□□□□ 0.36
CHGBP05060 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.28■□□□□ 0.36
CHGBP05060 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CHGBP05060 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CHGBP05060 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHGBP05060 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHGBP05060 AL161670.2-201ENST00000557650 1227 ntBASIC17.28■□□□□ 0.36
CHGBP05060 DRG2-220ENST00000583355 891 ntTSL 3 BASIC17.28■□□□□ 0.36
CHGBP05060 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.28■□□□□ 0.36
CHGBP05060 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CHGBP05060 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CHGBP05060 OS9-204ENST00000389146 2091 ntTSL 2 BASIC17.28■□□□□ 0.36
CHGBP05060 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHGBP05060 AC041040.2-201ENST00000622926 2899 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms