Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDGFBP01127 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.33□□□□□ -0.12
PDGFBP01127 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PDGFBP01127 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDGFBP01127 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.33□□□□□ -0.12
PDGFBP01127 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PDGFBP01127 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PDGFBP01127 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
PDGFBP01127 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
PDGFBP01127 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PDGFBP01127 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.32□□□□□ -0.12
PDGFBP01127 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.32□□□□□ -0.12
PDGFBP01127 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.32□□□□□ -0.12
PDGFBP01127 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 LINP1-201ENST00000417112 917 ntTSL 2 BASIC14.32□□□□□ -0.12
PDGFBP01127 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 AL773545.2-201ENST00000442149 472 ntBASIC14.32□□□□□ -0.12
PDGFBP01127 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC14.32□□□□□ -0.12
PDGFBP01127 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC14.32□□□□□ -0.12
PDGFBP01127 ALG1L7P-201ENST00000502317 768 ntBASIC14.32□□□□□ -0.12
PDGFBP01127 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC14.32□□□□□ -0.12
PDGFBP01127 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC14.32□□□□□ -0.12
PDGFBP01127 RN7SL524P-201ENST00000581152 300 ntBASIC14.32□□□□□ -0.12
PDGFBP01127 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC14.32□□□□□ -0.12
PDGFBP01127 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC14.32□□□□□ -0.12
PDGFBP01127 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC14.32□□□□□ -0.12
PDGFBP01127 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC14.32□□□□□ -0.12
PDGFBP01127 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PDGFBP01127 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC14.32□□□□□ -0.12
PDGFBP01127 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC14.32□□□□□ -0.12
PDGFBP01127 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC14.32□□□□□ -0.12
PDGFBP01127 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
PDGFBP01127 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.32□□□□□ -0.12
PDGFBP01127 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.32□□□□□ -0.12
PDGFBP01127 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
PDGFBP01127 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PDGFBP01127 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.32□□□□□ -0.12
PDGFBP01127 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFBP01127 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFBP01127 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFBP01127 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFBP01127 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
PDGFBP01127 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFBP01127 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC14.31□□□□□ -0.12
PDGFBP01127 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
PDGFBP01127 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFBP01127 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFBP01127 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
PDGFBP01127 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFBP01127 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFBP01127 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.31□□□□□ -0.12
PDGFBP01127 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFBP01127 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFBP01127 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC14.31□□□□□ -0.12
PDGFBP01127 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFBP01127 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC14.31□□□□□ -0.12
PDGFBP01127 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC14.31□□□□□ -0.12
PDGFBP01127 AC006328.1-201ENST00000437571 379 ntBASIC14.31□□□□□ -0.12
PDGFBP01127 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC14.31□□□□□ -0.12
PDGFBP01127 RN7SL578P-201ENST00000477781 283 ntBASIC14.31□□□□□ -0.12
PDGFBP01127 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC14.31□□□□□ -0.12
PDGFBP01127 RN7SL605P-201ENST00000577229 281 ntBASIC14.31□□□□□ -0.12
PDGFBP01127 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC14.31□□□□□ -0.12
PDGFBP01127 AL450487.2-201ENST00000615934 407 ntBASIC14.31□□□□□ -0.12
PDGFBP01127 NF1P11-201ENST00000621292 1282 ntBASIC14.31□□□□□ -0.12
PDGFBP01127 AC245369.7-201ENST00000631386 350 ntBASIC14.31□□□□□ -0.12
PDGFBP01127 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
PDGFBP01127 BX322534.1-201ENST00000635574 241 ntBASIC14.31□□□□□ -0.12
PDGFBP01127 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC14.31□□□□□ -0.12
PDGFBP01127 AC215524.1-201ENST00000635696 241 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms