Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM3A6NNA2 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 AC234644.1-201ENST00000406065 370 ntBASIC15.1■□□□□ 0.01
SRRM3A6NNA2 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 AC008267.1-201ENST00000474858 1069 ntBASIC15.1■□□□□ 0.01
SRRM3A6NNA2 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 AC023310.1-201ENST00000554836 735 ntBASIC15.1■□□□□ 0.01
SRRM3A6NNA2 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM3A6NNA2 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 NCLP1-201ENST00000445357 1963 ntBASIC15.09■□□□□ 0.01
SRRM3A6NNA2 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 AC024075.2-201ENST00000598112 1473 ntBASIC15.09■□□□□ 0.01
SRRM3A6NNA2 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.09■□□□□ 0.01
SRRM3A6NNA2 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 MAGEA5-201ENST00000446757 942 ntBASIC15.09■□□□□ 0.01
SRRM3A6NNA2 FTLP1-201ENST00000449155 526 ntBASIC15.09■□□□□ 0.01
SRRM3A6NNA2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 KRT90P-201ENST00000549264 1064 ntBASIC15.09■□□□□ 0.01
SRRM3A6NNA2 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 MIR6074-201ENST00000612054 107 ntBASIC15.09■□□□□ 0.01
SRRM3A6NNA2 AC005702.4-201ENST00000618393 416 ntBASIC15.09■□□□□ 0.01
SRRM3A6NNA2 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 POM121L14P-201ENST00000406100 1558 ntBASIC15.09■□□□□ 0.01
SRRM3A6NNA2 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.09■□□□□ 0.01
SRRM3A6NNA2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms