Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 SPDYE18-201ENST00000510091 1050 ntBASIC15.84■□□□□ 0.13
CCDC66A2RUB6 AC022447.6-201ENST00000515522 438 ntBASIC15.84■□□□□ 0.13
CCDC66A2RUB6 AC135586.1-201ENST00000539323 574 ntBASIC15.84■□□□□ 0.13
CCDC66A2RUB6 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 AL049840.4-201ENST00000602422 811 ntBASIC15.84■□□□□ 0.13
CCDC66A2RUB6 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCDC66A2RUB6 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC15.83■□□□□ 0.13
CCDC66A2RUB6 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCDC66A2RUB6 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCDC66A2RUB6 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC15.83■□□□□ 0.13
CCDC66A2RUB6 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.83■□□□□ 0.13
CCDC66A2RUB6 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCDC66A2RUB6 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCDC66A2RUB6 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.83■□□□□ 0.13
CCDC66A2RUB6 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC66A2RUB6 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
CCDC66A2RUB6 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CCDC66A2RUB6 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC66A2RUB6 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CCDC66A2RUB6 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.83■□□□□ 0.12
CCDC66A2RUB6 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.83■□□□□ 0.12
CCDC66A2RUB6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CCDC66A2RUB6 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.83■□□□□ 0.12
CCDC66A2RUB6 AC093813.1-201ENST00000605066 256 ntBASIC15.83■□□□□ 0.12
CCDC66A2RUB6 AC008738.7-201ENST00000609744 511 ntBASIC15.83■□□□□ 0.12
CCDC66A2RUB6 AC093512.1-201ENST00000617969 520 ntBASIC15.83■□□□□ 0.12
CCDC66A2RUB6 AC004840.1-201ENST00000636359 365 ntBASIC15.83■□□□□ 0.12
CCDC66A2RUB6 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC66A2RUB6 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CCDC66A2RUB6 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC66A2RUB6 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC66A2RUB6 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC66A2RUB6 AP002761.4-201ENST00000565433 3361 ntBASIC15.83■□□□□ 0.12
CCDC66A2RUB6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CCDC66A2RUB6 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC66A2RUB6 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CCDC66A2RUB6 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC66A2RUB6 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC66A2RUB6 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC66A2RUB6 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CCDC66A2RUB6 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC66A2RUB6 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC66A2RUB6 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC66A2RUB6 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CCDC66A2RUB6 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC66A2RUB6 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 HMGN1P19-201ENST00000436976 333 ntBASIC15.82■□□□□ 0.12
CCDC66A2RUB6 RPL13AP25-201ENST00000484130 612 ntBASIC15.82■□□□□ 0.12
CCDC66A2RUB6 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms