Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 MEG3_2.1-201ENST00000611456 105 ntBASIC13.67□□□□□ -0.22
CTSFQ9UBX1 AL353770.1-201ENST00000614915 403 ntBASIC13.67□□□□□ -0.22
CTSFQ9UBX1 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 LINC01165-201ENST00000445190 1623 ntBASIC13.67□□□□□ -0.22
CTSFQ9UBX1 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 AC107918.4-201ENST00000641966 3141 ntBASIC13.67□□□□□ -0.22
CTSFQ9UBX1 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
CTSFQ9UBX1 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.66□□□□□ -0.22
CTSFQ9UBX1 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 MIR4754-201ENST00000582477 89 ntBASIC13.66□□□□□ -0.22
CTSFQ9UBX1 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 AL133499.1-201ENST00000596207 608 ntBASIC13.66□□□□□ -0.22
CTSFQ9UBX1 AC079336.7-201ENST00000623428 1078 ntBASIC13.66□□□□□ -0.22
CTSFQ9UBX1 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 AC215219.1-201ENST00000400706 1817 ntBASIC13.66□□□□□ -0.22
CTSFQ9UBX1 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CTSFQ9UBX1 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CTSFQ9UBX1 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.65□□□□□ -0.22
CTSFQ9UBX1 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CTSFQ9UBX1 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CTSFQ9UBX1 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CTSFQ9UBX1 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CTSFQ9UBX1 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.65□□□□□ -0.22
CTSFQ9UBX1 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.65□□□□□ -0.22
CTSFQ9UBX1 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CTSFQ9UBX1 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
CTSFQ9UBX1 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CTSFQ9UBX1 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CTSFQ9UBX1 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CTSFQ9UBX1 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CTSFQ9UBX1 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.65□□□□□ -0.22
CTSFQ9UBX1 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CTSFQ9UBX1 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CTSFQ9UBX1 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CTSFQ9UBX1 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.65□□□□□ -0.22
CTSFQ9UBX1 OR2I1P-209ENST00000641730 5365 ntBASIC13.65□□□□□ -0.22
CTSFQ9UBX1 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms