Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM11Q96F44 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.37■□□□□ 0.05
TRIM11Q96F44 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM11Q96F44 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TRIM11Q96F44 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM11Q96F44 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM11Q96F44 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM11Q96F44 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM11Q96F44 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.37■□□□□ 0.05
TRIM11Q96F44 DUX4L46-201ENST00000566845 751 ntBASIC15.37■□□□□ 0.05
TRIM11Q96F44 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM11Q96F44 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM11Q96F44 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
TRIM11Q96F44 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM11Q96F44 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM11Q96F44 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TRIM11Q96F44 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRIM11Q96F44 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM11Q96F44 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM11Q96F44 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM11Q96F44 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM11Q96F44 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM11Q96F44 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM11Q96F44 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM11Q96F44 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TRIM11Q96F44 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM11Q96F44 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM11Q96F44 HIST2H2BB-201ENST00000449108 381 ntBASIC15.36■□□□□ 0.05
TRIM11Q96F44 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TRIM11Q96F44 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.36■□□□□ 0.05
TRIM11Q96F44 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.36■□□□□ 0.05
TRIM11Q96F44 CR383656.12-201ENST00000549567 513 ntBASIC15.36■□□□□ 0.05
TRIM11Q96F44 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM11Q96F44 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM11Q96F44 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.36■□□□□ 0.05
TRIM11Q96F44 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.36■□□□□ 0.05
TRIM11Q96F44 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.36■□□□□ 0.05
TRIM11Q96F44 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TRIM11Q96F44 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM11Q96F44 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM11Q96F44 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM11Q96F44 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM11Q96F44 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM11Q96F44 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM11Q96F44 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TRIM11Q96F44 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM11Q96F44 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM11Q96F44 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM11Q96F44 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM11Q96F44 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM11Q96F44 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM11Q96F44 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRIM11Q96F44 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.35■□□□□ 0.05
TRIM11Q96F44 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
TRIM11Q96F44 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.35■□□□□ 0.05
TRIM11Q96F44 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM11Q96F44 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRIM11Q96F44 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM11Q96F44 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.35■□□□□ 0.05
TRIM11Q96F44 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.35■□□□□ 0.05
TRIM11Q96F44 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.35■□□□□ 0.05
TRIM11Q96F44 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.35■□□□□ 0.05
TRIM11Q96F44 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM11Q96F44 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM11Q96F44 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRIM11Q96F44 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.35■□□□□ 0.05
TRIM11Q96F44 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM11Q96F44 MIR6720-201ENST00000611664 98 ntBASIC15.35■□□□□ 0.05
TRIM11Q96F44 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM11Q96F44 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.35■□□□□ 0.05
TRIM11Q96F44 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM11Q96F44 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM11Q96F44 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.35■□□□□ 0.05
TRIM11Q96F44 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.35■□□□□ 0.05
TRIM11Q96F44 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms