Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.71■□□□□ 0.1
PGBD4Q96DM1 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PGBD4Q96DM1 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.71■□□□□ 0.1
PGBD4Q96DM1 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PGBD4Q96DM1 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
PGBD4Q96DM1 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PGBD4Q96DM1 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 COX6A1P2-201ENST00000620597 330 ntBASIC15.7■□□□□ 0.1
PGBD4Q96DM1 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.7■□□□□ 0.1
PGBD4Q96DM1 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PGBD4Q96DM1 KRT8P31-201ENST00000504812 1408 ntBASIC15.68■□□□□ 0.1
PGBD4Q96DM1 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PGBD4Q96DM1 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms