Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHD5Q8TDI0 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.46□□□□□ -0.09
CHD5Q8TDI0 AL583805.1-201ENST00000391389 531 ntBASIC14.46□□□□□ -0.09
CHD5Q8TDI0 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.46□□□□□ -0.09
CHD5Q8TDI0 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.46□□□□□ -0.09
CHD5Q8TDI0 RN7SL530P-201ENST00000485097 298 ntBASIC14.46□□□□□ -0.09
CHD5Q8TDI0 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.46□□□□□ -0.09
CHD5Q8TDI0 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.46□□□□□ -0.09
CHD5Q8TDI0 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.46□□□□□ -0.09
CHD5Q8TDI0 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CHD5Q8TDI0 MIR4522-201ENST00000584932 87 ntBASIC14.46□□□□□ -0.09
CHD5Q8TDI0 RPL17P45-201ENST00000586289 509 ntBASIC14.46□□□□□ -0.09
CHD5Q8TDI0 AL353770.1-201ENST00000614915 403 ntBASIC14.46□□□□□ -0.09
CHD5Q8TDI0 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.46□□□□□ -0.09
CHD5Q8TDI0 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CHD5Q8TDI0 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
CHD5Q8TDI0 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.46□□□□□ -0.09
CHD5Q8TDI0 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
CHD5Q8TDI0 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.46□□□□□ -0.09
CHD5Q8TDI0 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHD5Q8TDI0 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CHD5Q8TDI0 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHD5Q8TDI0 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CHD5Q8TDI0 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
CHD5Q8TDI0 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.46□□□□□ -0.1
CHD5Q8TDI0 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.46□□□□□ -0.1
CHD5Q8TDI0 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CHD5Q8TDI0 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 AK2P2-201ENST00000439142 405 ntBASIC14.45□□□□□ -0.1
CHD5Q8TDI0 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 CROCCP1-201ENST00000426910 5675 ntBASIC14.45□□□□□ -0.1
CHD5Q8TDI0 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 IGLV3-15-201ENST00000518356 244 ntBASIC14.45□□□□□ -0.1
CHD5Q8TDI0 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 MIR6769A-201ENST00000617340 73 ntBASIC14.45□□□□□ -0.1
CHD5Q8TDI0 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CHD5Q8TDI0 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 SOD2-202ENST00000367054 815 ntTSL 2 BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 AC051619.9-201ENST00000623237 597 ntBASIC14.44□□□□□ -0.1
CHD5Q8TDI0 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.44□□□□□ -0.1
CHD5Q8TDI0 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms