Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RSPO1Q2MKA7 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 AP002353.1-201ENST00000528257 1599 ntBASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 AC092580.1-201ENST00000433998 658 ntBASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 AC021723.1-201ENST00000486306 515 ntBASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 AL512310.5-201ENST00000551999 515 ntBASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 AL591471.1-201ENST00000621855 229 ntBASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 AC092299.1-201ENST00000632679 757 ntBASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 AC068587.8-201ENST00000641239 219 ntBASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.49□□□□□ -0.41
RSPO1Q2MKA7 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 AC018629.1-201ENST00000623381 1736 ntBASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 AHCYP4-201ENST00000419201 1315 ntBASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 POM121L10P-201ENST00000436994 1285 ntBASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 SNORD3B-2-202ENST00000571722 791 ntBASIC12.48□□□□□ -0.41
RSPO1Q2MKA7 AC104982.3-201ENST00000581995 514 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms