Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO4Q2I0M5 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO4Q2I0M5 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO4Q2I0M5 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.9□□□□□ -0.18
RSPO4Q2I0M5 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO4Q2I0M5 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.9□□□□□ -0.18
RSPO4Q2I0M5 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.9□□□□□ -0.18
RSPO4Q2I0M5 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.9□□□□□ -0.18
RSPO4Q2I0M5 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.9□□□□□ -0.18
RSPO4Q2I0M5 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
RSPO4Q2I0M5 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC13.9□□□□□ -0.18
RSPO4Q2I0M5 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO4Q2I0M5 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO4Q2I0M5 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.9□□□□□ -0.19
RSPO4Q2I0M5 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
RSPO4Q2I0M5 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
RSPO4Q2I0M5 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 AGGF1P1-201ENST00000509500 2073 ntBASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 MSANTD2P1-201ENST00000445341 1368 ntBASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 CFL1P6-201ENST00000400899 494 ntBASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 HNRNPA1P25-201ENST00000422644 937 ntBASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 PSAT1P2-201ENST00000426107 972 ntBASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 RBPMSLP-201ENST00000433427 502 ntBASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 RN7SL672P-201ENST00000474091 317 ntBASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 AC120057.1-201ENST00000483947 663 ntBASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 LY6E-215ENST00000523847 427 ntTSL 3 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 ACY3-202ENST00000529256 933 ntTSL 3 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 NT5C-204ENST00000578337 582 ntTSL 2 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 Z99916.3-201ENST00000623422 1080 ntBASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 AC005274.1-201ENST00000623460 802 ntBASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 PPT1-215ENST00000641471 2368 ntBASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO4Q2I0M5 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 AL596257.1-201ENST00000641463 2694 ntBASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RSPO4Q2I0M5 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms