Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDK3Q00526 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDK3Q00526 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDK3Q00526 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CDK3Q00526 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDK3Q00526 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.21□□□□□ -0.13
CDK3Q00526 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.21□□□□□ -0.13
CDK3Q00526 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDK3Q00526 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CDK3Q00526 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDK3Q00526 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDK3Q00526 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDK3Q00526 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.21□□□□□ -0.13
CDK3Q00526 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDK3Q00526 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDK3Q00526 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CDK3Q00526 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CDK3Q00526 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CDK3Q00526 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
CDK3Q00526 OR2K2-202ENST00000374428 1038 ntBASIC14.21□□□□□ -0.13
CDK3Q00526 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.21□□□□□ -0.13
CDK3Q00526 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDK3Q00526 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.21□□□□□ -0.13
CDK3Q00526 AC026320.2-201ENST00000434379 478 ntBASIC14.21□□□□□ -0.13
CDK3Q00526 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.21□□□□□ -0.13
CDK3Q00526 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.21□□□□□ -0.13
CDK3Q00526 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.21□□□□□ -0.13
CDK3Q00526 AL133499.1-201ENST00000596207 608 ntBASIC14.21□□□□□ -0.13
CDK3Q00526 AC006453.1-201ENST00000636037 1257 ntBASIC14.21□□□□□ -0.13
CDK3Q00526 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CDK3Q00526 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDK3Q00526 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDK3Q00526 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDK3Q00526 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CDK3Q00526 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CDK3Q00526 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.21□□□□□ -0.14
CDK3Q00526 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
CDK3Q00526 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.21□□□□□ -0.14
CDK3Q00526 AC103702.1-201ENST00000548801 2630 ntBASIC14.21□□□□□ -0.14
CDK3Q00526 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDK3Q00526 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDK3Q00526 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDK3Q00526 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.21□□□□□ -0.14
CDK3Q00526 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.21□□□□□ -0.14
CDK3Q00526 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDK3Q00526 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.21□□□□□ -0.14
CDK3Q00526 FAM90A2P-201ENST00000511144 1395 ntBASIC14.21□□□□□ -0.14
CDK3Q00526 FAM90A25P-201ENST00000528404 1395 ntBASIC14.21□□□□□ -0.14
CDK3Q00526 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDK3Q00526 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDK3Q00526 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.21□□□□□ -0.14
CDK3Q00526 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CDK3Q00526 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDK3Q00526 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CDK3Q00526 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CDK3Q00526 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.2□□□□□ -0.14
CDK3Q00526 CCT8L1P-201ENST00000465400 1674 ntBASIC14.2□□□□□ -0.14
CDK3Q00526 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDK3Q00526 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CDK3Q00526 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.2□□□□□ -0.14
CDK3Q00526 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDK3Q00526 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.2□□□□□ -0.14
CDK3Q00526 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDK3Q00526 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.2□□□□□ -0.14
CDK3Q00526 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.2□□□□□ -0.14
CDK3Q00526 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDK3Q00526 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.2□□□□□ -0.14
CDK3Q00526 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CDK3Q00526 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDK3Q00526 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDK3Q00526 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDK3Q00526 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.2□□□□□ -0.14
CDK3Q00526 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CDK3Q00526 BANF1P3-201ENST00000412556 261 ntBASIC14.2□□□□□ -0.14
CDK3Q00526 RPS9P1-201ENST00000419943 583 ntBASIC14.2□□□□□ -0.14
CDK3Q00526 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.2□□□□□ -0.14
CDK3Q00526 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.2□□□□□ -0.14
CDK3Q00526 CEP164P1-201ENST00000455142 418 ntBASIC14.2□□□□□ -0.14
CDK3Q00526 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDK3Q00526 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.2□□□□□ -0.14
CDK3Q00526 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.2□□□□□ -0.14
CDK3Q00526 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CDK3Q00526 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.2□□□□□ -0.14
CDK3Q00526 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CDK3Q00526 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.2□□□□□ -0.14
CDK3Q00526 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CDK3Q00526 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CDK3Q00526 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.2□□□□□ -0.14
CDK3Q00526 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.2□□□□□ -0.14
CDK3Q00526 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
CDK3Q00526 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.2□□□□□ -0.14
CDK3Q00526 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.2□□□□□ -0.14
CDK3Q00526 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDK3Q00526 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDK3Q00526 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDK3Q00526 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.2□□□□□ -0.14
CDK3Q00526 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CDK3Q00526 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDK3Q00526 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDK3Q00526 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms