Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 DMBT1P1-203ENST00000636837 4628 ntBASIC15.23■□□□□ 0.03
IRX4P78413 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.23■□□□□ 0.03
IRX4P78413 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IRX4P78413 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IRX4P78413 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IRX4P78413 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IRX4P78413 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IRX4P78413 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.23■□□□□ 0.03
IRX4P78413 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.23■□□□□ 0.03
IRX4P78413 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IRX4P78413 TPM3P8-201ENST00000330554 643 ntBASIC15.23■□□□□ 0.03
IRX4P78413 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IRX4P78413 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.23■□□□□ 0.03
IRX4P78413 HSPB1P2-201ENST00000448722 546 ntBASIC15.23■□□□□ 0.03
IRX4P78413 RPS2P36-201ENST00000456516 831 ntBASIC15.23■□□□□ 0.03
IRX4P78413 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
IRX4P78413 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.23■□□□□ 0.03
IRX4P78413 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IRX4P78413 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.23■□□□□ 0.03
IRX4P78413 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.23■□□□□ 0.03
IRX4P78413 SPCS2P2-201ENST00000603270 608 ntBASIC15.23■□□□□ 0.03
IRX4P78413 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.23■□□□□ 0.03
IRX4P78413 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
IRX4P78413 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IRX4P78413 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IRX4P78413 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IRX4P78413 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IRX4P78413 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
IRX4P78413 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
IRX4P78413 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.23■□□□□ 0.03
IRX4P78413 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
IRX4P78413 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IRX4P78413 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IRX4P78413 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC15.22■□□□□ 0.03
IRX4P78413 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
IRX4P78413 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
IRX4P78413 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IRX4P78413 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
IRX4P78413 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IRX4P78413 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IRX4P78413 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IRX4P78413 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
IRX4P78413 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
IRX4P78413 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.22■□□□□ 0.03
IRX4P78413 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IRX4P78413 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
IRX4P78413 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
IRX4P78413 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
IRX4P78413 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
IRX4P78413 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
IRX4P78413 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.22■□□□□ 0.03
IRX4P78413 LDHBP1-201ENST00000455730 1119 ntBASIC15.22■□□□□ 0.03
IRX4P78413 AC245884.6-201ENST00000515672 1067 ntBASIC15.22■□□□□ 0.03
IRX4P78413 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.22■□□□□ 0.03
IRX4P78413 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.22■□□□□ 0.03
IRX4P78413 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.22■□□□□ 0.03
IRX4P78413 MIR5572-201ENST00000583188 137 ntBASIC15.22■□□□□ 0.03
IRX4P78413 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.22■□□□□ 0.03
IRX4P78413 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.22■□□□□ 0.03
IRX4P78413 CU633904.3-201ENST00000624042 1029 ntBASIC15.22■□□□□ 0.03
IRX4P78413 AC128714.1-201ENST00000637035 887 ntBASIC15.22■□□□□ 0.03
IRX4P78413 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
IRX4P78413 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
IRX4P78413 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.22■□□□□ 0.03
IRX4P78413 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
IRX4P78413 AL023775.1-201ENST00000454907 1746 ntBASIC15.22■□□□□ 0.03
IRX4P78413 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.22■□□□□ 0.03
IRX4P78413 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.22■□□□□ 0.03
IRX4P78413 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC15.22■□□□□ 0.03
IRX4P78413 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
IRX4P78413 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.22■□□□□ 0.03
IRX4P78413 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IRX4P78413 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.21■□□□□ 0.03
IRX4P78413 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IRX4P78413 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IRX4P78413 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.21■□□□□ 0.03
IRX4P78413 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IRX4P78413 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
IRX4P78413 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IRX4P78413 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
IRX4P78413 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IRX4P78413 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IRX4P78413 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
IRX4P78413 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IRX4P78413 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IRX4P78413 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
IRX4P78413 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
IRX4P78413 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
IRX4P78413 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
IRX4P78413 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
IRX4P78413 MIR769-201ENST00000390225 118 ntBASIC15.21■□□□□ 0.03
IRX4P78413 ACTBP8-201ENST00000403258 1108 ntBASIC15.21■□□□□ 0.03
IRX4P78413 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.21■□□□□ 0.03
IRX4P78413 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
IRX4P78413 AC016700.1-201ENST00000429424 312 ntBASIC15.21■□□□□ 0.03
IRX4P78413 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.21■□□□□ 0.03
IRX4P78413 NKAIN1P1-201ENST00000435754 582 ntBASIC15.21■□□□□ 0.03
IRX4P78413 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.21■□□□□ 0.03
IRX4P78413 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.21■□□□□ 0.03
IRX4P78413 AC253536.4-201ENST00000440539 267 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms