Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
CMC4P56277 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC10.82□□□□□ -0.68
CMC4P56277 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 TMBIM7P-202ENST00000641474 1516 ntBASIC10.82□□□□□ -0.68
CMC4P56277 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
CMC4P56277 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
CMC4P56277 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC10.82□□□□□ -0.68
CMC4P56277 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC10.82□□□□□ -0.68
CMC4P56277 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
CMC4P56277 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
CMC4P56277 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC10.82□□□□□ -0.68
CMC4P56277 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC10.82□□□□□ -0.68
CMC4P56277 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CMC4P56277 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC10.81□□□□□ -0.68
CMC4P56277 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC10.81□□□□□ -0.68
CMC4P56277 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CMC4P56277 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 RET-205ENST00000615310 4337 ntTSL 5 BASIC10.81□□□□□ -0.68
CMC4P56277 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
CMC4P56277 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
CMC4P56277 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC10.81□□□□□ -0.68
CMC4P56277 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC10.81□□□□□ -0.68
CMC4P56277 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 AC020907.1-201ENST00000616460 1350 ntBASIC10.81□□□□□ -0.68
CMC4P56277 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
CMC4P56277 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC10.81□□□□□ -0.68
CMC4P56277 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
CMC4P56277 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CMC4P56277 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
CMC4P56277 RN7SL832P-201ENST00000607781 1756 ntBASIC10.81□□□□□ -0.68
CMC4P56277 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC10.81□□□□□ -0.68
CMC4P56277 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 RN7SKP214-201ENST00000364208 315 ntBASIC10.81□□□□□ -0.68
CMC4P56277 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 USP17L6P-201ENST00000382470 1197 ntBASIC10.81□□□□□ -0.68
CMC4P56277 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC10.81□□□□□ -0.68
CMC4P56277 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC10.81□□□□□ -0.68
CMC4P56277 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC10.81□□□□□ -0.68
CMC4P56277 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC10.81□□□□□ -0.68
CMC4P56277 PGAM1P5-201ENST00000548011 764 ntBASIC10.81□□□□□ -0.68
CMC4P56277 EMC4-209ENST00000559421 497 ntTSL 2 BASIC10.81□□□□□ -0.68
CMC4P56277 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC10.81□□□□□ -0.68
CMC4P56277 AC005730.2-201ENST00000564549 1184 ntBASIC10.81□□□□□ -0.68
CMC4P56277 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC10.81□□□□□ -0.68
CMC4P56277 SNORD3B-2-202ENST00000571722 791 ntBASIC10.81□□□□□ -0.68
CMC4P56277 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC10.81□□□□□ -0.68
CMC4P56277 SKA2-205ENST00000580541 689 ntTSL 3 BASIC10.81□□□□□ -0.68
CMC4P56277 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC10.81□□□□□ -0.68
CMC4P56277 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
CMC4P56277 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC10.81□□□□□ -0.68
CMC4P56277 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC10.81□□□□□ -0.68
CMC4P56277 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC10.81□□□□□ -0.68
CMC4P56277 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
CMC4P56277 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CMC4P56277 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
CMC4P56277 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
CMC4P56277 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC10.81□□□□□ -0.68
CMC4P56277 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC10.81□□□□□ -0.68
CMC4P56277 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CMC4P56277 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 AC006504.5-208ENST00000588784 2401 ntBASIC10.8□□□□□ -0.68
CMC4P56277 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC10.8□□□□□ -0.68
CMC4P56277 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC10.8□□□□□ -0.68
CMC4P56277 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
CMC4P56277 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
CMC4P56277 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC10.8□□□□□ -0.68
CMC4P56277 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CMC4P56277 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms