Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC026803.1-201ENST00000569130 274 ntBASIC14.83□□□□□ -0.04
SLC6A4P31645 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC6A4P31645 AC106872.11-201ENST00000605838 421 ntBASIC14.83□□□□□ -0.04
SLC6A4P31645 MIR6769A-201ENST00000617340 73 ntBASIC14.83□□□□□ -0.04
SLC6A4P31645 AC015967.2-201ENST00000624092 234 ntBASIC14.83□□□□□ -0.04
SLC6A4P31645 AC006435.4-201ENST00000625037 234 ntBASIC14.83□□□□□ -0.04
SLC6A4P31645 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.83□□□□□ -0.04
SLC6A4P31645 AL356737.1-201ENST00000634391 234 ntBASIC14.83□□□□□ -0.04
SLC6A4P31645 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A4P31645 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SLC6A4P31645 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC6A4P31645 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SLC6A4P31645 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A4P31645 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A4P31645 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.83□□□□□ -0.04
SLC6A4P31645 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A4P31645 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A4P31645 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.83□□□□□ -0.04
SLC6A4P31645 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A4P31645 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A4P31645 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLC6A4P31645 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
SLC6A4P31645 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC6A4P31645 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 KRT8P19-201ENST00000551916 1455 ntBASIC14.82□□□□□ -0.04
SLC6A4P31645 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SLC6A4P31645 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC6A4P31645 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC6A4P31645 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SLC6A4P31645 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC6A4P31645 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 CCT8L1P-201ENST00000465400 1674 ntBASIC14.82□□□□□ -0.04
SLC6A4P31645 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC6A4P31645 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SLC6A4P31645 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.82□□□□□ -0.04
SLC6A4P31645 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 DUX4L50-201ENST00000455245 715 ntBASIC14.82□□□□□ -0.04
SLC6A4P31645 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.82□□□□□ -0.04
SLC6A4P31645 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 RNA5SP423-201ENST00000517127 109 ntBASIC14.82□□□□□ -0.04
SLC6A4P31645 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC6A4P31645 AC140658.4-201ENST00000561990 352 ntBASIC14.82□□□□□ -0.04
SLC6A4P31645 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC6A4P31645 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC6A4P31645 PHBP15-201ENST00000574228 665 ntBASIC14.82□□□□□ -0.04
SLC6A4P31645 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.82□□□□□ -0.04
SLC6A4P31645 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
SLC6A4P31645 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC6A4P31645 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SLC6A4P31645 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SLC6A4P31645 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC6A4P31645 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC6A4P31645 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.82□□□□□ -0.04
SLC6A4P31645 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.82□□□□□ -0.04
SLC6A4P31645 AL022313.4-201ENST00000562756 2046 ntBASIC14.82□□□□□ -0.04
SLC6A4P31645 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLC6A4P31645 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A4P31645 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SLC6A4P31645 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC6A4P31645 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A4P31645 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A4P31645 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SLC6A4P31645 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A4P31645 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SLC6A4P31645 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
SLC6A4P31645 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A4P31645 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A4P31645 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SLC6A4P31645 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC6A4P31645 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC6A4P31645 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SLC6A4P31645 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLC6A4P31645 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.81□□□□□ -0.04
SLC6A4P31645 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.81□□□□□ -0.04
SLC6A4P31645 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.81□□□□□ -0.04
SLC6A4P31645 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.81□□□□□ -0.04
SLC6A4P31645 CEP164P1-201ENST00000455142 418 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms