Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BCKDHBP21953 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BCKDHBP21953 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
BCKDHBP21953 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.2□□□□□ -0.14
BCKDHBP21953 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
BCKDHBP21953 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BCKDHBP21953 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.2□□□□□ -0.14
BCKDHBP21953 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.2□□□□□ -0.14
BCKDHBP21953 RNVU1-8-201ENST00000364272 125 ntBASIC14.2□□□□□ -0.14
BCKDHBP21953 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC14.2□□□□□ -0.14
BCKDHBP21953 ACTG1P19-201ENST00000418987 1116 ntBASIC14.2□□□□□ -0.14
BCKDHBP21953 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.2□□□□□ -0.14
BCKDHBP21953 AL135901.1-201ENST00000451812 333 ntBASIC14.2□□□□□ -0.14
BCKDHBP21953 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BCKDHBP21953 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC14.2□□□□□ -0.14
BCKDHBP21953 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.2□□□□□ -0.14
BCKDHBP21953 AP001527.2-201ENST00000614441 631 ntBASIC14.2□□□□□ -0.14
BCKDHBP21953 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.2□□□□□ -0.14
BCKDHBP21953 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC14.2□□□□□ -0.14
BCKDHBP21953 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.2□□□□□ -0.14
BCKDHBP21953 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.2□□□□□ -0.14
BCKDHBP21953 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
BCKDHBP21953 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BCKDHBP21953 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BCKDHBP21953 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
BCKDHBP21953 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BCKDHBP21953 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BCKDHBP21953 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.2□□□□□ -0.14
BCKDHBP21953 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
BCKDHBP21953 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BCKDHBP21953 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BCKDHBP21953 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
BCKDHBP21953 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.2□□□□□ -0.14
BCKDHBP21953 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BCKDHBP21953 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.19□□□□□ -0.14
BCKDHBP21953 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BCKDHBP21953 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BCKDHBP21953 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BCKDHBP21953 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BCKDHBP21953 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BCKDHBP21953 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BCKDHBP21953 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BCKDHBP21953 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.19□□□□□ -0.14
BCKDHBP21953 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
BCKDHBP21953 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BCKDHBP21953 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
BCKDHBP21953 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BCKDHBP21953 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
BCKDHBP21953 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.19□□□□□ -0.14
BCKDHBP21953 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BCKDHBP21953 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.19□□□□□ -0.14
BCKDHBP21953 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BCKDHBP21953 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BCKDHBP21953 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
BCKDHBP21953 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BCKDHBP21953 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BCKDHBP21953 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BCKDHBP21953 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC14.19□□□□□ -0.14
BCKDHBP21953 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC14.19□□□□□ -0.14
BCKDHBP21953 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.19□□□□□ -0.14
BCKDHBP21953 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC14.19□□□□□ -0.14
BCKDHBP21953 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BCKDHBP21953 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC14.19□□□□□ -0.14
BCKDHBP21953 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC14.19□□□□□ -0.14
BCKDHBP21953 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC14.19□□□□□ -0.14
BCKDHBP21953 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC14.19□□□□□ -0.14
BCKDHBP21953 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC14.19□□□□□ -0.14
BCKDHBP21953 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
BCKDHBP21953 KRT8P2-201ENST00000556193 944 ntBASIC14.19□□□□□ -0.14
BCKDHBP21953 AC010632.2-201ENST00000588369 1224 ntBASIC14.19□□□□□ -0.14
BCKDHBP21953 AP005264.6-204ENST00000588436 719 ntBASIC14.19□□□□□ -0.14
BCKDHBP21953 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.19□□□□□ -0.14
BCKDHBP21953 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BCKDHBP21953 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BCKDHBP21953 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
BCKDHBP21953 MIR600HG-201ENST00000449175 5984 ntBASIC14.19□□□□□ -0.14
BCKDHBP21953 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
BCKDHBP21953 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
BCKDHBP21953 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
BCKDHBP21953 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
BCKDHBP21953 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
BCKDHBP21953 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BCKDHBP21953 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
BCKDHBP21953 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BCKDHBP21953 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.19□□□□□ -0.14
BCKDHBP21953 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.18□□□□□ -0.14
BCKDHBP21953 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
BCKDHBP21953 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BCKDHBP21953 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BCKDHBP21953 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BCKDHBP21953 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
BCKDHBP21953 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BCKDHBP21953 PPT1-215ENST00000641471 2368 ntBASIC14.18□□□□□ -0.14
BCKDHBP21953 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BCKDHBP21953 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
BCKDHBP21953 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
BCKDHBP21953 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.18□□□□□ -0.14
BCKDHBP21953 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
BCKDHBP21953 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
BCKDHBP21953 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms