Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
MSR1P21757 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MSR1P21757 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
MSR1P21757 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
MSR1P21757 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.88□□□□□ -0.35
MSR1P21757 AL928921.2-201ENST00000641325 2442 ntBASIC12.88□□□□□ -0.35
MSR1P21757 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
MSR1P21757 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.88□□□□□ -0.35
MSR1P21757 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
MSR1P21757 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MSR1P21757 AC064801.2-201ENST00000625052 1303 ntBASIC12.88□□□□□ -0.35
MSR1P21757 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.87□□□□□ -0.35
MSR1P21757 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.87□□□□□ -0.35
MSR1P21757 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
MSR1P21757 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MSR1P21757 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.87□□□□□ -0.35
MSR1P21757 HSPA8P5-201ENST00000456928 2069 ntBASIC12.87□□□□□ -0.35
MSR1P21757 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.87□□□□□ -0.35
MSR1P21757 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
MSR1P21757 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
MSR1P21757 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.87□□□□□ -0.35
MSR1P21757 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
MSR1P21757 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MSR1P21757 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
MSR1P21757 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MSR1P21757 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MSR1P21757 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
MSR1P21757 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
MSR1P21757 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.87□□□□□ -0.35
MSR1P21757 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.87□□□□□ -0.35
MSR1P21757 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MSR1P21757 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
MSR1P21757 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.87□□□□□ -0.35
MSR1P21757 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
MSR1P21757 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MSR1P21757 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MSR1P21757 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MSR1P21757 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
MSR1P21757 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MSR1P21757 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.87□□□□□ -0.35
MSR1P21757 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.87□□□□□ -0.35
MSR1P21757 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.87□□□□□ -0.35
MSR1P21757 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.87□□□□□ -0.35
MSR1P21757 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.87□□□□□ -0.35
MSR1P21757 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.87□□□□□ -0.35
MSR1P21757 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MSR1P21757 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.87□□□□□ -0.35
MSR1P21757 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
MSR1P21757 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.87□□□□□ -0.35
MSR1P21757 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.87□□□□□ -0.35
MSR1P21757 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
MSR1P21757 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.87□□□□□ -0.35
MSR1P21757 AL035252.4-201ENST00000624174 288 ntBASIC12.87□□□□□ -0.35
MSR1P21757 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
MSR1P21757 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MSR1P21757 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
MSR1P21757 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
MSR1P21757 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MSR1P21757 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
MSR1P21757 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.87□□□□□ -0.35
MSR1P21757 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.87□□□□□ -0.35
MSR1P21757 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
MSR1P21757 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
MSR1P21757 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
MSR1P21757 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MSR1P21757 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
MSR1P21757 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MSR1P21757 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.87□□□□□ -0.35
MSR1P21757 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
MSR1P21757 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
MSR1P21757 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
MSR1P21757 AL031595.1-201ENST00000623969 4709 ntBASIC12.87□□□□□ -0.35
MSR1P21757 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
MSR1P21757 AC063926.2-201ENST00000623766 1308 ntBASIC12.87□□□□□ -0.35
MSR1P21757 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
MSR1P21757 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.87□□□□□ -0.35
MSR1P21757 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
MSR1P21757 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MSR1P21757 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.86□□□□□ -0.35
MSR1P21757 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MSR1P21757 DMBT1P1-203ENST00000636837 4628 ntBASIC12.86□□□□□ -0.35
MSR1P21757 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MSR1P21757 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MSR1P21757 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MSR1P21757 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MSR1P21757 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.86□□□□□ -0.35
MSR1P21757 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
MSR1P21757 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MSR1P21757 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
MSR1P21757 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.86□□□□□ -0.35
MSR1P21757 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.86□□□□□ -0.35
MSR1P21757 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.86□□□□□ -0.35
MSR1P21757 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
MSR1P21757 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.86□□□□□ -0.35
MSR1P21757 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.86□□□□□ -0.35
MSR1P21757 U91328.1-201ENST00000437528 223 ntBASIC12.86□□□□□ -0.35
MSR1P21757 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.86□□□□□ -0.35
MSR1P21757 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
MSR1P21757 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.86□□□□□ -0.35
MSR1P21757 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms