Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
RAB4AP20338 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC11.2□□□□□ -0.62
RAB4AP20338 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC11.2□□□□□ -0.62
RAB4AP20338 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC11.2□□□□□ -0.62
RAB4AP20338 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 HDLBP-203ENST00000391975 6372 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC11.2□□□□□ -0.62
RAB4AP20338 AC018712.1-201ENST00000455767 687 ntBASIC11.2□□□□□ -0.62
RAB4AP20338 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC11.2□□□□□ -0.62
RAB4AP20338 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC11.2□□□□□ -0.62
RAB4AP20338 KRT18P21-201ENST00000515767 1272 ntBASIC11.2□□□□□ -0.62
RAB4AP20338 UNC93B6-202ENST00000528242 690 ntBASIC11.2□□□□□ -0.62
RAB4AP20338 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC11.2□□□□□ -0.62
RAB4AP20338 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC11.2□□□□□ -0.62
RAB4AP20338 AQP6-205ENST00000618286 829 ntTSL 5 BASIC11.2□□□□□ -0.62
RAB4AP20338 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
RAB4AP20338 IDS-201ENST00000340855 7619 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC11.2□□□□□ -0.62
RAB4AP20338 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC11.2□□□□□ -0.62
RAB4AP20338 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC11.2□□□□□ -0.62
RAB4AP20338 FGF11-202ENST00000572907 2358 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC11.2□□□□□ -0.62
RAB4AP20338 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
RAB4AP20338 AC092139.4-201ENST00000624318 2794 ntBASIC11.2□□□□□ -0.62
RAB4AP20338 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC11.2□□□□□ -0.62
RAB4AP20338 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RAB4AP20338 SCO1-201ENST00000255390 9612 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB4AP20338 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
RAB4AP20338 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
RAB4AP20338 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB4AP20338 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC11.19□□□□□ -0.62
RAB4AP20338 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RAB4AP20338 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB4AP20338 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB4AP20338 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB4AP20338 PCDH12-201ENST00000231484 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB4AP20338 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB4AP20338 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB4AP20338 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB4AP20338 SMAD9-201ENST00000350148 5447 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB4AP20338 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB4AP20338 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RAB4AP20338 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC11.19□□□□□ -0.62
RAB4AP20338 LINC02133-202ENST00000569726 2626 ntTSL 2 BASIC11.19□□□□□ -0.62
RAB4AP20338 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB4AP20338 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB4AP20338 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.19□□□□□ -0.62
RAB4AP20338 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB4AP20338 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB4AP20338 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC11.19□□□□□ -0.62
RAB4AP20338 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB4AP20338 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB4AP20338 FAM197Y8-203ENST00000450145 560 ntBASIC11.19□□□□□ -0.62
RAB4AP20338 AC092910.1-201ENST00000482027 1129 ntBASIC11.19□□□□□ -0.62
RAB4AP20338 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC11.19□□□□□ -0.62
RAB4AP20338 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC11.19□□□□□ -0.62
RAB4AP20338 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RAB4AP20338 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC11.19□□□□□ -0.62
RAB4AP20338 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC11.19□□□□□ -0.62
RAB4AP20338 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC11.19□□□□□ -0.62
RAB4AP20338 TBCB-205ENST00000585746 875 ntTSL 3 BASIC11.19□□□□□ -0.62
RAB4AP20338 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
RAB4AP20338 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC11.19□□□□□ -0.62
RAB4AP20338 FAM95B1-212ENST00000592873 4692 ntBASIC11.19□□□□□ -0.62
RAB4AP20338 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC11.19□□□□□ -0.62
RAB4AP20338 AL031008.1-201ENST00000619963 541 ntBASIC11.19□□□□□ -0.62
RAB4AP20338 AC055713.1-201ENST00000498967 8279 ntTSL 2 BASIC11.19□□□□□ -0.62
RAB4AP20338 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC11.19□□□□□ -0.62
RAB4AP20338 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RAB4AP20338 AC022400.8-201ENST00000623453 3599 ntBASIC11.19□□□□□ -0.62
RAB4AP20338 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
RAB4AP20338 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB4AP20338 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC11.19□□□□□ -0.62
RAB4AP20338 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC11.19□□□□□ -0.62
RAB4AP20338 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB4AP20338 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
RAB4AP20338 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB4AP20338 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
RAB4AP20338 CPEB3-202ENST00000412050 7664 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB4AP20338 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB4AP20338 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
RAB4AP20338 TNS1-220ENST00000611415 6509 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms