Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
COL5A2P05997 PGK1P2-201ENST00000431702 1214 ntBASIC18.49■□□□□ 0.55
COL5A2P05997 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC18.49■□□□□ 0.55
COL5A2P05997 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL5A2P05997 RN7SL605P-201ENST00000577229 281 ntBASIC18.49■□□□□ 0.55
COL5A2P05997 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL5A2P05997 WARS-203ENST00000358655 2466 ntTSL 2 BASIC18.49■□□□□ 0.55
COL5A2P05997 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC18.49■□□□□ 0.55
COL5A2P05997 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
COL5A2P05997 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL5A2P05997 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
COL5A2P05997 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.49■□□□□ 0.55
COL5A2P05997 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL5A2P05997 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL5A2P05997 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL5A2P05997 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL5A2P05997 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL5A2P05997 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC18.48■□□□□ 0.55
COL5A2P05997 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
COL5A2P05997 AC022532.1-201ENST00000624563 1728 ntBASIC18.48■□□□□ 0.55
COL5A2P05997 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.48■□□□□ 0.55
COL5A2P05997 HYMAI-201ENST00000635591 3347 ntBASIC18.48■□□□□ 0.55
COL5A2P05997 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL5A2P05997 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL5A2P05997 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
COL5A2P05997 FDPSP7-201ENST00000429043 1054 ntBASIC18.48■□□□□ 0.55
COL5A2P05997 AC079250.1-201ENST00000456046 531 ntBASIC18.48■□□□□ 0.55
COL5A2P05997 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC18.48■□□□□ 0.55
COL5A2P05997 AC147876.1-201ENST00000504408 322 ntBASIC18.48■□□□□ 0.55
COL5A2P05997 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC18.48■□□□□ 0.55
COL5A2P05997 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC18.48■□□□□ 0.55
COL5A2P05997 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC18.48■□□□□ 0.55
COL5A2P05997 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC18.48■□□□□ 0.55
COL5A2P05997 AC026120.2-201ENST00000617239 309 ntBASIC18.48■□□□□ 0.55
COL5A2P05997 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC18.48■□□□□ 0.55
COL5A2P05997 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC18.48■□□□□ 0.55
COL5A2P05997 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL5A2P05997 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC18.48■□□□□ 0.55
COL5A2P05997 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC18.48■□□□□ 0.55
COL5A2P05997 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL5A2P05997 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL5A2P05997 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.48■□□□□ 0.55
COL5A2P05997 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL5A2P05997 PAUPAR-201ENST00000630360 2965 ntBASIC18.48■□□□□ 0.55
COL5A2P05997 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
COL5A2P05997 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.48■□□□□ 0.55
COL5A2P05997 MTHFR-210ENST00000641407 2387 ntBASIC18.48■□□□□ 0.55
COL5A2P05997 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL5A2P05997 OR6D1P-202ENST00000641007 5290 ntBASIC18.48■□□□□ 0.55
COL5A2P05997 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
COL5A2P05997 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL5A2P05997 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL5A2P05997 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
COL5A2P05997 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
COL5A2P05997 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL5A2P05997 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL5A2P05997 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC18.47■□□□□ 0.55
COL5A2P05997 AC005722.1-201ENST00000431878 964 ntBASIC18.47■□□□□ 0.55
COL5A2P05997 RNU1-80P-201ENST00000459500 161 ntBASIC18.47■□□□□ 0.55
COL5A2P05997 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC18.47■□□□□ 0.55
COL5A2P05997 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC18.47■□□□□ 0.55
COL5A2P05997 AC016582.2-202ENST00000587765 1094 ntBASIC18.47■□□□□ 0.55
COL5A2P05997 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC18.47■□□□□ 0.55
COL5A2P05997 AC048382.6-201ENST00000621980 1223 ntBASIC18.47■□□□□ 0.55
COL5A2P05997 AC245369.7-201ENST00000631386 350 ntBASIC18.47■□□□□ 0.55
COL5A2P05997 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC18.47■□□□□ 0.55
COL5A2P05997 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL5A2P05997 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
COL5A2P05997 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL5A2P05997 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL5A2P05997 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
COL5A2P05997 TCAF2P1-201ENST00000291129 2421 ntBASIC18.47■□□□□ 0.55
COL5A2P05997 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL5A2P05997 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COL5A2P05997 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL5A2P05997 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.47■□□□□ 0.55
COL5A2P05997 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL5A2P05997 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC18.47■□□□□ 0.55
COL5A2P05997 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC18.47■□□□□ 0.55
COL5A2P05997 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
COL5A2P05997 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COL5A2P05997 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
COL5A2P05997 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC18.47■□□□□ 0.55
COL5A2P05997 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
COL5A2P05997 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
COL5A2P05997 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL5A2P05997 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COL5A2P05997 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COL5A2P05997 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC18.46■□□□□ 0.55
COL5A2P05997 USP17L6P-201ENST00000382470 1197 ntBASIC18.46■□□□□ 0.55
COL5A2P05997 AC098657.1-201ENST00000416270 1135 ntBASIC18.46■□□□□ 0.55
COL5A2P05997 PHBP10-201ENST00000416467 784 ntBASIC18.46■□□□□ 0.55
COL5A2P05997 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC18.46■□□□□ 0.55
COL5A2P05997 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC18.46■□□□□ 0.55
COL5A2P05997 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC18.46■□□□□ 0.55
COL5A2P05997 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC18.46■□□□□ 0.55
COL5A2P05997 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC18.46■□□□□ 0.55
COL5A2P05997 TREX1-203ENST00000456089 629 ntTSL 3 BASIC18.46■□□□□ 0.55
COL5A2P05997 AC112250.1-201ENST00000504640 745 ntBASIC18.46■□□□□ 0.55
COL5A2P05997 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms