Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 AC025884.2-201ENST00000553429 711 ntBASIC21.21■□□□□ 0.99
COMMD3-BMI1R4GMX3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.21■□□□□ 0.99
COMMD3-BMI1R4GMX3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.21■□□□□ 0.99
COMMD3-BMI1R4GMX3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COMMD3-BMI1R4GMX3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.21■□□□□ 0.99
COMMD3-BMI1R4GMX3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.21■□□□□ 0.99
COMMD3-BMI1R4GMX3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COMMD3-BMI1R4GMX3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
COMMD3-BMI1R4GMX3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
COMMD3-BMI1R4GMX3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
COMMD3-BMI1R4GMX3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
COMMD3-BMI1R4GMX3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COMMD3-BMI1R4GMX3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.2■□□□□ 0.98
COMMD3-BMI1R4GMX3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.2■□□□□ 0.98
COMMD3-BMI1R4GMX3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COMMD3-BMI1R4GMX3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
COMMD3-BMI1R4GMX3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COMMD3-BMI1R4GMX3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.2■□□□□ 0.98
COMMD3-BMI1R4GMX3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.2■□□□□ 0.98
COMMD3-BMI1R4GMX3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.2■□□□□ 0.98
COMMD3-BMI1R4GMX3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
COMMD3-BMI1R4GMX3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
COMMD3-BMI1R4GMX3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.19■□□□□ 0.98
COMMD3-BMI1R4GMX3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
COMMD3-BMI1R4GMX3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COMMD3-BMI1R4GMX3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
COMMD3-BMI1R4GMX3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COMMD3-BMI1R4GMX3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COMMD3-BMI1R4GMX3 MIR639-201ENST00000384974 98 ntBASIC21.19■□□□□ 0.98
COMMD3-BMI1R4GMX3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.19■□□□□ 0.98
COMMD3-BMI1R4GMX3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
COMMD3-BMI1R4GMX3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.18■□□□□ 0.98
COMMD3-BMI1R4GMX3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
COMMD3-BMI1R4GMX3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COMMD3-BMI1R4GMX3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.18■□□□□ 0.98
COMMD3-BMI1R4GMX3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.18■□□□□ 0.98
COMMD3-BMI1R4GMX3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
COMMD3-BMI1R4GMX3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COMMD3-BMI1R4GMX3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COMMD3-BMI1R4GMX3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COMMD3-BMI1R4GMX3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COMMD3-BMI1R4GMX3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COMMD3-BMI1R4GMX3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.18■□□□□ 0.98
COMMD3-BMI1R4GMX3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
COMMD3-BMI1R4GMX3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
COMMD3-BMI1R4GMX3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COMMD3-BMI1R4GMX3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COMMD3-BMI1R4GMX3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COMMD3-BMI1R4GMX3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COMMD3-BMI1R4GMX3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.17■□□□□ 0.98
COMMD3-BMI1R4GMX3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
COMMD3-BMI1R4GMX3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
COMMD3-BMI1R4GMX3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
COMMD3-BMI1R4GMX3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
COMMD3-BMI1R4GMX3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.17■□□□□ 0.98
COMMD3-BMI1R4GMX3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COMMD3-BMI1R4GMX3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.17■□□□□ 0.98
COMMD3-BMI1R4GMX3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COMMD3-BMI1R4GMX3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COMMD3-BMI1R4GMX3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COMMD3-BMI1R4GMX3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
COMMD3-BMI1R4GMX3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
COMMD3-BMI1R4GMX3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
COMMD3-BMI1R4GMX3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
COMMD3-BMI1R4GMX3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COMMD3-BMI1R4GMX3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.16■□□□□ 0.98
COMMD3-BMI1R4GMX3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.16■□□□□ 0.98
COMMD3-BMI1R4GMX3 MIR3960-201ENST00000583311 91 ntBASIC21.16■□□□□ 0.98
COMMD3-BMI1R4GMX3 AC092296.2-201ENST00000589470 999 ntBASIC21.16■□□□□ 0.98
COMMD3-BMI1R4GMX3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.16■□□□□ 0.98
COMMD3-BMI1R4GMX3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COMMD3-BMI1R4GMX3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
COMMD3-BMI1R4GMX3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COMMD3-BMI1R4GMX3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COMMD3-BMI1R4GMX3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
COMMD3-BMI1R4GMX3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.15■□□□□ 0.98
COMMD3-BMI1R4GMX3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COMMD3-BMI1R4GMX3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
COMMD3-BMI1R4GMX3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
COMMD3-BMI1R4GMX3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COMMD3-BMI1R4GMX3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.98
COMMD3-BMI1R4GMX3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COMMD3-BMI1R4GMX3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
COMMD3-BMI1R4GMX3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.14■□□□□ 0.97
COMMD3-BMI1R4GMX3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COMMD3-BMI1R4GMX3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COMMD3-BMI1R4GMX3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.14■□□□□ 0.97
COMMD3-BMI1R4GMX3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COMMD3-BMI1R4GMX3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COMMD3-BMI1R4GMX3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COMMD3-BMI1R4GMX3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COMMD3-BMI1R4GMX3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COMMD3-BMI1R4GMX3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.14■□□□□ 0.97
COMMD3-BMI1R4GMX3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
COMMD3-BMI1R4GMX3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COMMD3-BMI1R4GMX3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COMMD3-BMI1R4GMX3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COMMD3-BMI1R4GMX3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COMMD3-BMI1R4GMX3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
COMMD3-BMI1R4GMX3 SMPD5-203ENST00000639008 1464 ntBASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms