Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 LARP1-210ENST00000519931 569 ntTSL 48.79□□□□□ -12e-7■■■□□ 15.2
DDX52Q9Y2R4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.053e-6■■■□□ 15.2
DDX52Q9Y2R4 CTBP2-208ENST00000476817 705 ntTSL 324.84■■□□□ 1.573e-6■■■□□ 15.2
DDX52Q9Y2R4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.213e-6■■■□□ 15.2
DDX52Q9Y2R4 CTBP2-212ENST00000530884 578 ntTSL 312.37□□□□□ -0.433e-6■■■□□ 15.2
DDX52Q9Y2R4 CTBP2-203ENST00000337195 6939 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.573e-6■■■□□ 15.2
DDX52Q9Y2R4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.112e-6■■■□□ 15.2
DDX52Q9Y2R4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.072e-6■■■□□ 15.2
DDX52Q9Y2R4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.022e-6■■■□□ 15.2
DDX52Q9Y2R4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 22e-6■■■□□ 15.2
DDX52Q9Y2R4 TMUB1-206ENST00000488752 584 ntTSL 226.79■■□□□ 1.882e-6■■■□□ 15.2
DDX52Q9Y2R4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC24.41■■□□□ 1.52e-6■■■□□ 15.2
DDX52Q9Y2R4 COL18A1-207ENST00000473212 2515 ntTSL 223.84■■□□□ 1.412e-6■■■□□ 15.2
DDX52Q9Y2R4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC22.79■■□□□ 1.242e-6■■■□□ 15.2
DDX52Q9Y2R4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.112e-6■■■□□ 15.2
DDX52Q9Y2R4 SLC4A2-205ENST00000463414 793 ntTSL 320.46■□□□□ 0.872e-6■■■□□ 15.2
DDX52Q9Y2R4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.16■□□□□ 0.822e-6■■■□□ 15.2
DDX52Q9Y2R4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.82e-6■■■□□ 15.2
DDX52Q9Y2R4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.35■□□□□ 0.692e-6■■■□□ 15.2
DDX52Q9Y2R4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.692e-6■■■□□ 15.2
DDX52Q9Y2R4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.27■□□□□ 0.682e-6■■■□□ 15.2
DDX52Q9Y2R4 COL18A1-205ENST00000423214 839 ntTSL 519.13■□□□□ 0.652e-6■■■□□ 15.2
DDX52Q9Y2R4 SLC4A2-215ENST00000488420 610 ntTSL 318.86■□□□□ 0.612e-6■■■□□ 15.2
DDX52Q9Y2R4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.372e-6■■■□□ 15.2
DDX52Q9Y2R4 CLPTM1L-214ENST00000513250 567 ntTSL 317.09■□□□□ 0.332e-6■■■□□ 15.2
DDX52Q9Y2R4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.242e-6■■■□□ 15.2
DDX52Q9Y2R4 SLC4A2-212ENST00000482950 500 ntTSL 416.53■□□□□ 0.242e-6■■■□□ 15.2
DDX52Q9Y2R4 CLPTM1L-203ENST00000503151 627 ntTSL 315.85■□□□□ 0.132e-6■■■□□ 15.2
DDX52Q9Y2R4 CLPTM1L-210ENST00000508765 631 ntTSL 315.16■□□□□ 0.022e-6■■■□□ 15.2
DDX52Q9Y2R4 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC14□□□□□ -0.172e-6■■■□□ 15.2
DDX52Q9Y2R4 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.172e-6■■■□□ 15.2
DDX52Q9Y2R4 TMUB1-207ENST00000492838 550 ntTSL 513.16□□□□□ -0.32e-6■■■□□ 15.2
DDX52Q9Y2R4 CLPTM1L-202ENST00000503042 3540 ntTSL 212.87□□□□□ -0.352e-6■■■□□ 15.2
DDX52Q9Y2R4 CLPTM1L-208ENST00000507195 628 ntTSL 512.48□□□□□ -0.412e-6■■■□□ 15.2
DDX52Q9Y2R4 RNF2-203ENST00000453650 939 ntTSL 510.22□□□□□ -0.772e-6■■■□□ 15.2
DDX52Q9Y2R4 FBXO11-204ENST00000424163 560 ntTSL 42.85□□□□□ -1.952e-12■■■□□ 15.2
DDX52Q9Y2R4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.432e-6■■■□□ 15.1
DDX52Q9Y2R4 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.28■□□□□ 0.362e-6■■■□□ 15.1
DDX52Q9Y2R4 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.132e-6■■■□□ 15.1
DDX52Q9Y2R4 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.222e-6■■■□□ 15.1
DDX52Q9Y2R4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.342e-6■■■□□ 15.1
DDX52Q9Y2R4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.73■■□□□ 1.072e-6■■■□□ 15.1
DDX52Q9Y2R4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.68e-7■■■□□ 15.1
DDX52Q9Y2R4 POLR2A-209ENST00000617998 6751 ntTSL 1 (best)11.29□□□□□ -0.68e-7■■■□□ 15.1
DDX52Q9Y2R4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.451e-6■■■□□ 15.1
DDX52Q9Y2R4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.351e-6■■■□□ 15.1
DDX52Q9Y2R4 FBXO17-203ENST00000596025 935 ntTSL 223.49■■□□□ 1.351e-6■■■□□ 15.1
DDX52Q9Y2R4 FBXO17-207ENST00000601394 2366 ntTSL 517.84■□□□□ 0.451e-6■■■□□ 15.1
DDX52Q9Y2R4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.41e-6■■■□□ 15.1
DDX52Q9Y2R4 CTAGE5-216ENST00000556990 568 ntTSL 417.17■□□□□ 0.341e-6■■■□□ 15.1
DDX52Q9Y2R4 CTAGE5-202ENST00000280083 3860 ntTSL 1 (best) BASIC13.64□□□□□ -0.231e-6■■■□□ 15.1
DDX52Q9Y2R4 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.231e-6■■■□□ 15.1
DDX52Q9Y2R4 CHST15-205ENST00000628426 3553 ntTSL 2 BASIC13.51□□□□□ -0.251e-6■■■□□ 15.1
DDX52Q9Y2R4 CHST15-202ENST00000435907 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.311e-6■■■□□ 15.1
DDX52Q9Y2R4 CTAGE5-206ENST00000396158 3695 ntTSL 1 (best) BASIC12.26□□□□□ -0.451e-6■■■□□ 15.1
DDX52Q9Y2R4 CTAGE5-214ENST00000556148 2526 ntTSL 1 (best) BASIC12□□□□□ -0.491e-6■■■□□ 15.1
DDX52Q9Y2R4 CTAGE5-203ENST00000341502 4091 ntTSL 1 (best) BASIC11.04□□□□□ -0.641e-6■■■□□ 15.1
DDX52Q9Y2R4 CTAGE5-205ENST00000348007 2762 ntTSL 1 (best) BASIC10.4□□□□□ -0.741e-6■■■□□ 15.1
DDX52Q9Y2R4 CHST15-203ENST00000462406 826 ntTSL 29.04□□□□□ -0.961e-6■■■□□ 15.1
DDX52Q9Y2R4 CTAGE5-213ENST00000555716 558 ntTSL 47.87□□□□□ -1.151e-6■■■□□ 15.1
DDX52Q9Y2R4 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.94□□□□□ -1.31e-6■■■□□ 15.1
DDX52Q9Y2R4 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.85□□□□□ -1.311e-6■■■□□ 15.1
DDX52Q9Y2R4 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.27□□□□□ -1.411e-6■■■□□ 15.1
DDX52Q9Y2R4 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.86□□□□□ -1.471e-6■■■□□ 15.1
DDX52Q9Y2R4 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.481e-6■■■□□ 15.1
DDX52Q9Y2R4 CTAGE5-211ENST00000554392 527 ntTSL 44.46□□□□□ -1.71e-6■■■□□ 15.1
DDX52Q9Y2R4 PSME4-208ENST00000481518 886 ntTSL 527.41■■□□□ 1.982e-13■■■□□ 15
DDX52Q9Y2R4 PSME4-201ENST00000389993 6581 ntTSL 1 (best)15.45■□□□□ 0.062e-13■■■□□ 15
DDX52Q9Y2R4 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.142e-13■■■□□ 15
DDX52Q9Y2R4 MAEA-209ENST00000506530 5371 ntTSL 220.21■□□□□ 0.834e-6■■■□□ 15
DDX52Q9Y2R4 MAEA-215ENST00000512289 2426 ntTSL 219.6■□□□□ 0.734e-6■■■□□ 15
DDX52Q9Y2R4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.682e-6■■■□□ 15
DDX52Q9Y2R4 DPH7-210ENST00000479650 1797 ntTSL 521.89■■□□□ 1.092e-6■■■□□ 15
DDX52Q9Y2R4 DPH7-207ENST00000475100 919 ntTSL 319.56■□□□□ 0.722e-6■■■□□ 15
DDX52Q9Y2R4 DPH7-206ENST00000472113 1414 ntTSL 518.2■□□□□ 0.52e-6■■■□□ 15
DDX52Q9Y2R4 DPH7-212ENST00000485189 797 ntTSL 318.12■□□□□ 0.492e-6■■■□□ 15
DDX52Q9Y2R4 DPH7-209ENST00000477690 1220 ntTSL 316.89■□□□□ 0.292e-6■■■□□ 15
DDX52Q9Y2R4 DPH7-204ENST00000467768 750 ntTSL 516.48■□□□□ 0.232e-6■■■□□ 15
DDX52Q9Y2R4 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC36.32■■■■□ 3.42e-6■■■□□ 14.9
DDX52Q9Y2R4 CYHR1-207ENST00000528558 907 ntTSL 225.57■■□□□ 1.682e-6■■■□□ 14.9
DDX52Q9Y2R4 AGAP3-219ENST00000485904 683 ntTSL 323.84■■□□□ 1.412e-6■■■□□ 14.9
DDX52Q9Y2R4 MICALL2-209ENST00000479007 1855 ntTSL 222.93■■□□□ 1.262e-6■■■□□ 14.9
DDX52Q9Y2R4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.132e-6■■■□□ 14.9
DDX52Q9Y2R4 RANBP3-215ENST00000588879 535 ntTSL 521.92■■□□□ 1.12e-6■■■□□ 14.9
DDX52Q9Y2R4 RANBP3-223ENST00000591736 573 ntTSL 421.92■■□□□ 1.12e-6■■■□□ 14.9
DDX52Q9Y2R4 RANBP3-210ENST00000587463 461 ntTSL 521.92■■□□□ 1.12e-6■■■□□ 14.9
DDX52Q9Y2R4 MICALL2-205ENST00000467783 639 ntTSL 321.17■□□□□ 0.982e-6■■■□□ 14.9
DDX52Q9Y2R4 CYHR1-206ENST00000526887 1012 ntTSL 320.6■□□□□ 0.892e-6■■■□□ 14.9
DDX52Q9Y2R4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.872e-6■■■□□ 14.9
DDX52Q9Y2R4 RANBP3-224ENST00000591881 575 ntTSL 520.44■□□□□ 0.862e-6■■■□□ 14.9
DDX52Q9Y2R4 RANBP3-227ENST00000592266 589 ntTSL 420.44■□□□□ 0.862e-6■■■□□ 14.9
DDX52Q9Y2R4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.862e-6■■■□□ 14.9
DDX52Q9Y2R4 AFF4-206ENST00000465484 1729 ntTSL 1 (best)20.22■□□□□ 0.832e-6■■■□□ 14.9
DDX52Q9Y2R4 AFF4-209ENST00000491831 1667 ntTSL 1 (best)20.16■□□□□ 0.822e-6■■■□□ 14.9
DDX52Q9Y2R4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.784e-6■■■□□ 14.9
DDX52Q9Y2R4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.772e-6■■■□□ 14.9
DDX52Q9Y2R4 RANBP3-222ENST00000591333 557 ntTSL 418.89■□□□□ 0.612e-6■■■□□ 14.9
DDX52Q9Y2R4 RANBP3-217ENST00000589886 472 ntTSL 418.75■□□□□ 0.592e-6■■■□□ 14.9
DDX52Q9Y2R4 RANBP3-211ENST00000587479 547 ntTSL 418.71■□□□□ 0.592e-6■■■□□ 14.9
DDX52Q9Y2R4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.41■□□□□ 0.544e-6■■■□□ 14.9
Retrieved 100 of 4,483 protein–RNA pairs in 82.8 ms