Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.7■□□□□ 0.9
RPH3AQ9Y2J0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.7■□□□□ 0.9
RPH3AQ9Y2J0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.7■□□□□ 0.9
RPH3AQ9Y2J0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPH3AQ9Y2J0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPH3AQ9Y2J0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.7■□□□□ 0.9
RPH3AQ9Y2J0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.69■□□□□ 0.9
RPH3AQ9Y2J0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.69■□□□□ 0.9
RPH3AQ9Y2J0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPH3AQ9Y2J0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.69■□□□□ 0.9
RPH3AQ9Y2J0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RPH3AQ9Y2J0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPH3AQ9Y2J0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.68■□□□□ 0.9
RPH3AQ9Y2J0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPH3AQ9Y2J0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPH3AQ9Y2J0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPH3AQ9Y2J0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.68■□□□□ 0.9
RPH3AQ9Y2J0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPH3AQ9Y2J0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPH3AQ9Y2J0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPH3AQ9Y2J0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPH3AQ9Y2J0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
RPH3AQ9Y2J0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
RPH3AQ9Y2J0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPH3AQ9Y2J0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPH3AQ9Y2J0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.67■□□□□ 0.9
RPH3AQ9Y2J0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.67■□□□□ 0.9
RPH3AQ9Y2J0 MIR3621-201ENST00000580529 85 ntBASIC20.67■□□□□ 0.9
RPH3AQ9Y2J0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPH3AQ9Y2J0 ALDH1A3-203ENST00000557963 1670 ntBASIC20.67■□□□□ 0.9
RPH3AQ9Y2J0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPH3AQ9Y2J0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPH3AQ9Y2J0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPH3AQ9Y2J0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPH3AQ9Y2J0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.66■□□□□ 0.9
RPH3AQ9Y2J0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.66■□□□□ 0.9
RPH3AQ9Y2J0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPH3AQ9Y2J0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPH3AQ9Y2J0 AC004812.2-201ENST00000611079 2094 ntBASIC20.66■□□□□ 0.9
RPH3AQ9Y2J0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPH3AQ9Y2J0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPH3AQ9Y2J0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPH3AQ9Y2J0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPH3AQ9Y2J0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RPH3AQ9Y2J0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.65■□□□□ 0.9
RPH3AQ9Y2J0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.65■□□□□ 0.9
RPH3AQ9Y2J0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.65■□□□□ 0.9
RPH3AQ9Y2J0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPH3AQ9Y2J0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPH3AQ9Y2J0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPH3AQ9Y2J0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.64■□□□□ 0.9
RPH3AQ9Y2J0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPH3AQ9Y2J0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
RPH3AQ9Y2J0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.64■□□□□ 0.89
RPH3AQ9Y2J0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.64■□□□□ 0.89
RPH3AQ9Y2J0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPH3AQ9Y2J0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.64■□□□□ 0.89
RPH3AQ9Y2J0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.64■□□□□ 0.89
RPH3AQ9Y2J0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RPH3AQ9Y2J0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPH3AQ9Y2J0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPH3AQ9Y2J0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPH3AQ9Y2J0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPH3AQ9Y2J0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RPH3AQ9Y2J0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RPH3AQ9Y2J0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.63■□□□□ 0.89
RPH3AQ9Y2J0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RPH3AQ9Y2J0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RPH3AQ9Y2J0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.63■□□□□ 0.89
RPH3AQ9Y2J0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
RPH3AQ9Y2J0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPH3AQ9Y2J0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.63■□□□□ 0.89
RPH3AQ9Y2J0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.63■□□□□ 0.89
RPH3AQ9Y2J0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPH3AQ9Y2J0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RPH3AQ9Y2J0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPH3AQ9Y2J0 ABCB10P4-201ENST00000566803 2184 ntBASIC20.62■□□□□ 0.89
RPH3AQ9Y2J0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RPH3AQ9Y2J0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RPH3AQ9Y2J0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPH3AQ9Y2J0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RPH3AQ9Y2J0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RPH3AQ9Y2J0 AC131281.2-201ENST00000520478 145 ntBASIC20.62■□□□□ 0.89
RPH3AQ9Y2J0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.62■□□□□ 0.89
RPH3AQ9Y2J0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RPH3AQ9Y2J0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPH3AQ9Y2J0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.62■□□□□ 0.89
RPH3AQ9Y2J0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.62■□□□□ 0.89
RPH3AQ9Y2J0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.62■□□□□ 0.89
RPH3AQ9Y2J0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPH3AQ9Y2J0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RPH3AQ9Y2J0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
RPH3AQ9Y2J0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPH3AQ9Y2J0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPH3AQ9Y2J0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPH3AQ9Y2J0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RPH3AQ9Y2J0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RPH3AQ9Y2J0 AL139246.5-201ENST00000606645 996 ntBASIC20.61■□□□□ 0.89
RPH3AQ9Y2J0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPH3AQ9Y2J0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms