Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
CDK11AQ9UQ88 GTSE1-AS1-202ENST00000623117 1518 ntBASIC35.4■■■■□ 3.26
CDK11AQ9UQ88 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC35.4■■■■□ 3.26
CDK11AQ9UQ88 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
CDK11AQ9UQ88 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
CDK11AQ9UQ88 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
CDK11AQ9UQ88 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
CDK11AQ9UQ88 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC35.39■■■■□ 3.26
CDK11AQ9UQ88 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC35.39■■■■□ 3.26
CDK11AQ9UQ88 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
CDK11AQ9UQ88 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC35.38■■■■□ 3.25
CDK11AQ9UQ88 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
CDK11AQ9UQ88 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
CDK11AQ9UQ88 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
CDK11AQ9UQ88 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
CDK11AQ9UQ88 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC35.37■■■■□ 3.25
CDK11AQ9UQ88 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC35.37■■■■□ 3.25
CDK11AQ9UQ88 AC126544.1-201ENST00000580842 1059 ntBASIC35.37■■■■□ 3.25
CDK11AQ9UQ88 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC35.37■■■■□ 3.25
CDK11AQ9UQ88 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
CDK11AQ9UQ88 HLA-L-211ENST00000482052 1765 ntBASIC35.36■■■■□ 3.25
CDK11AQ9UQ88 AC091060.1-201ENST00000623524 1766 ntBASIC35.36■■■■□ 3.25
CDK11AQ9UQ88 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC35.36■■■■□ 3.25
CDK11AQ9UQ88 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
CDK11AQ9UQ88 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC35.36■■■■□ 3.25
CDK11AQ9UQ88 AC034268.1-201ENST00000441047 882 ntBASIC35.36■■■■□ 3.25
CDK11AQ9UQ88 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC35.36■■■■□ 3.25
CDK11AQ9UQ88 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC35.36■■■■□ 3.25
CDK11AQ9UQ88 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
CDK11AQ9UQ88 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC35.36■■■■□ 3.25
CDK11AQ9UQ88 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
CDK11AQ9UQ88 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC35.35■■■■□ 3.25
CDK11AQ9UQ88 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
CDK11AQ9UQ88 ALDH1A3-203ENST00000557963 1670 ntBASIC35.35■■■■□ 3.25
CDK11AQ9UQ88 AC141586.4-201ENST00000624558 1573 ntBASIC35.34■■■■□ 3.25
CDK11AQ9UQ88 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
CDK11AQ9UQ88 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
CDK11AQ9UQ88 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC35.34■■■■□ 3.25
CDK11AQ9UQ88 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC35.34■■■■□ 3.25
CDK11AQ9UQ88 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC35.34■■■■□ 3.25
CDK11AQ9UQ88 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC35.33■■■■□ 3.25
CDK11AQ9UQ88 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC35.33■■■■□ 3.25
CDK11AQ9UQ88 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
CDK11AQ9UQ88 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC35.33■■■■□ 3.25
CDK11AQ9UQ88 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
CDK11AQ9UQ88 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
CDK11AQ9UQ88 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC35.32■■■■□ 3.25
CDK11AQ9UQ88 YBX1P1-201ENST00000445822 960 ntBASIC35.32■■■■□ 3.24
CDK11AQ9UQ88 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC35.32■■■■□ 3.24
CDK11AQ9UQ88 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
CDK11AQ9UQ88 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC35.31■■■■□ 3.24
CDK11AQ9UQ88 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
CDK11AQ9UQ88 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC35.31■■■■□ 3.24
CDK11AQ9UQ88 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
CDK11AQ9UQ88 AICDA-202ENST00000537228 667 ntTSL 5 BASIC35.31■■■■□ 3.24
CDK11AQ9UQ88 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC35.31■■■■□ 3.24
CDK11AQ9UQ88 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
CDK11AQ9UQ88 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC35.31■■■■□ 3.24
CDK11AQ9UQ88 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC35.31■■■■□ 3.24
CDK11AQ9UQ88 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
CDK11AQ9UQ88 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC35.31■■■■□ 3.24
CDK11AQ9UQ88 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
CDK11AQ9UQ88 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC35.3■■■■□ 3.24
CDK11AQ9UQ88 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC35.3■■■■□ 3.24
CDK11AQ9UQ88 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
CDK11AQ9UQ88 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC35.3■■■■□ 3.24
CDK11AQ9UQ88 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC35.29■■■■□ 3.24
CDK11AQ9UQ88 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
CDK11AQ9UQ88 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
CDK11AQ9UQ88 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
CDK11AQ9UQ88 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
CDK11AQ9UQ88 TSPY26P-201ENST00000476365 1326 ntBASIC35.29■■■■□ 3.24
CDK11AQ9UQ88 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
CDK11AQ9UQ88 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC35.28■■■■□ 3.24
CDK11AQ9UQ88 ASB1-202ENST00000409297 878 ntTSL 5 BASIC35.28■■■■□ 3.24
CDK11AQ9UQ88 SLC47A1P1-202ENST00000449666 945 ntBASIC35.28■■■■□ 3.24
CDK11AQ9UQ88 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
CDK11AQ9UQ88 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC35.27■■■■□ 3.24
CDK11AQ9UQ88 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
CDK11AQ9UQ88 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC35.27■■■■□ 3.24
CDK11AQ9UQ88 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
CDK11AQ9UQ88 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC35.27■■■■□ 3.24
CDK11AQ9UQ88 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC35.27■■■■□ 3.24
CDK11AQ9UQ88 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC35.27■■■■□ 3.24
CDK11AQ9UQ88 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
CDK11AQ9UQ88 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC35.27■■■■□ 3.24
CDK11AQ9UQ88 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC35.26■■■■□ 3.24
CDK11AQ9UQ88 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC35.26■■■■□ 3.24
CDK11AQ9UQ88 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC35.26■■■■□ 3.24
CDK11AQ9UQ88 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
CDK11AQ9UQ88 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
CDK11AQ9UQ88 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC35.26■■■■□ 3.24
CDK11AQ9UQ88 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC35.26■■■■□ 3.24
CDK11AQ9UQ88 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC35.26■■■■□ 3.24
CDK11AQ9UQ88 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC35.26■■■■□ 3.24
CDK11AQ9UQ88 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.23
CDK11AQ9UQ88 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC35.26■■■■□ 3.23
CDK11AQ9UQ88 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
CDK11AQ9UQ88 NME4-202ENST00000382940 766 ntTSL 3 BASIC35.25■■■■□ 3.23
CDK11AQ9UQ88 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC35.25■■■■□ 3.23
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms