Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.88■□□□□ 0.45
SMCO4Q9NRQ5 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SMCO4Q9NRQ5 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SMCO4Q9NRQ5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SMCO4Q9NRQ5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SMCO4Q9NRQ5 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SMCO4Q9NRQ5 ANOS2P-203ENST00000472227 1816 ntBASIC17.87■□□□□ 0.45
SMCO4Q9NRQ5 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SMCO4Q9NRQ5 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC17.87■□□□□ 0.45
SMCO4Q9NRQ5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMCO4Q9NRQ5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.87■□□□□ 0.45
SMCO4Q9NRQ5 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.87■□□□□ 0.45
SMCO4Q9NRQ5 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.87■□□□□ 0.45
SMCO4Q9NRQ5 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SMCO4Q9NRQ5 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMCO4Q9NRQ5 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SMCO4Q9NRQ5 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMCO4Q9NRQ5 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMCO4Q9NRQ5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMCO4Q9NRQ5 AF106564.1-201ENST00000607058 2553 ntBASIC17.86■□□□□ 0.45
SMCO4Q9NRQ5 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.86■□□□□ 0.45
SMCO4Q9NRQ5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.86■□□□□ 0.45
SMCO4Q9NRQ5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SMCO4Q9NRQ5 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMCO4Q9NRQ5 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
SMCO4Q9NRQ5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.85■□□□□ 0.45
SMCO4Q9NRQ5 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
SMCO4Q9NRQ5 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.85■□□□□ 0.45
SMCO4Q9NRQ5 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.85■□□□□ 0.45
SMCO4Q9NRQ5 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.85■□□□□ 0.45
SMCO4Q9NRQ5 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.85■□□□□ 0.45
SMCO4Q9NRQ5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMCO4Q9NRQ5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMCO4Q9NRQ5 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SMCO4Q9NRQ5 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMCO4Q9NRQ5 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMCO4Q9NRQ5 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMCO4Q9NRQ5 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMCO4Q9NRQ5 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMCO4Q9NRQ5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SMCO4Q9NRQ5 FBXW4P1-201ENST00000426721 2239 ntBASIC17.84■□□□□ 0.45
SMCO4Q9NRQ5 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMCO4Q9NRQ5 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMCO4Q9NRQ5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMCO4Q9NRQ5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMCO4Q9NRQ5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMCO4Q9NRQ5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.84■□□□□ 0.45
SMCO4Q9NRQ5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMCO4Q9NRQ5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.83■□□□□ 0.45
SMCO4Q9NRQ5 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMCO4Q9NRQ5 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMCO4Q9NRQ5 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SMCO4Q9NRQ5 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SMCO4Q9NRQ5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMCO4Q9NRQ5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMCO4Q9NRQ5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.83■□□□□ 0.44
SMCO4Q9NRQ5 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMCO4Q9NRQ5 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMCO4Q9NRQ5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMCO4Q9NRQ5 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SMCO4Q9NRQ5 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMCO4Q9NRQ5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.82■□□□□ 0.44
SMCO4Q9NRQ5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
SMCO4Q9NRQ5 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMCO4Q9NRQ5 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMCO4Q9NRQ5 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMCO4Q9NRQ5 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SMCO4Q9NRQ5 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMCO4Q9NRQ5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.82■□□□□ 0.44
SMCO4Q9NRQ5 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
SMCO4Q9NRQ5 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMCO4Q9NRQ5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMCO4Q9NRQ5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SMCO4Q9NRQ5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SMCO4Q9NRQ5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SMCO4Q9NRQ5 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMCO4Q9NRQ5 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
SMCO4Q9NRQ5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SMCO4Q9NRQ5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SMCO4Q9NRQ5 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMCO4Q9NRQ5 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMCO4Q9NRQ5 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.81■□□□□ 0.44
SMCO4Q9NRQ5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMCO4Q9NRQ5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMCO4Q9NRQ5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.81■□□□□ 0.44
SMCO4Q9NRQ5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMCO4Q9NRQ5 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMCO4Q9NRQ5 AC026310.3-201ENST00000625186 2373 ntBASIC17.81■□□□□ 0.44
SMCO4Q9NRQ5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMCO4Q9NRQ5 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMCO4Q9NRQ5 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMCO4Q9NRQ5 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMCO4Q9NRQ5 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMCO4Q9NRQ5 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMCO4Q9NRQ5 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.8■□□□□ 0.44
SMCO4Q9NRQ5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMCO4Q9NRQ5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMCO4Q9NRQ5 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMCO4Q9NRQ5 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMCO4Q9NRQ5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms