Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.29■□□□□ 0.36
LINC00479Q96M42 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00479Q96M42 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.29■□□□□ 0.36
LINC00479Q96M42 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.29■□□□□ 0.36
LINC00479Q96M42 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00479Q96M42 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LINC00479Q96M42 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.29■□□□□ 0.36
LINC00479Q96M42 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LINC00479Q96M42 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.29■□□□□ 0.36
LINC00479Q96M42 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00479Q96M42 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.29■□□□□ 0.36
LINC00479Q96M42 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC00479Q96M42 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LINC00479Q96M42 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LINC00479Q96M42 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00479Q96M42 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LINC00479Q96M42 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00479Q96M42 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00479Q96M42 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00479Q96M42 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00479Q96M42 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00479Q96M42 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LINC00479Q96M42 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.28■□□□□ 0.36
LINC00479Q96M42 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.28■□□□□ 0.36
LINC00479Q96M42 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00479Q96M42 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00479Q96M42 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.28■□□□□ 0.36
LINC00479Q96M42 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.28■□□□□ 0.36
LINC00479Q96M42 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00479Q96M42 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00479Q96M42 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LINC00479Q96M42 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.28■□□□□ 0.36
LINC00479Q96M42 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC00479Q96M42 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
LINC00479Q96M42 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LINC00479Q96M42 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LINC00479Q96M42 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.27■□□□□ 0.36
LINC00479Q96M42 ECEL1P2-201ENST00000461596 1295 ntBASIC17.27■□□□□ 0.36
LINC00479Q96M42 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.27■□□□□ 0.36
LINC00479Q96M42 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.27■□□□□ 0.35
LINC00479Q96M42 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LINC00479Q96M42 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LINC00479Q96M42 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LINC00479Q96M42 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
LINC00479Q96M42 AL137060.1-201ENST00000618151 2648 ntBASIC17.27■□□□□ 0.35
LINC00479Q96M42 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LINC00479Q96M42 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00479Q96M42 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.26■□□□□ 0.35
LINC00479Q96M42 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.26■□□□□ 0.35
LINC00479Q96M42 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00479Q96M42 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LINC00479Q96M42 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LINC00479Q96M42 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.26■□□□□ 0.35
LINC00479Q96M42 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00479Q96M42 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00479Q96M42 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.26■□□□□ 0.35
LINC00479Q96M42 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LINC00479Q96M42 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.26■□□□□ 0.35
LINC00479Q96M42 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00479Q96M42 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC00479Q96M42 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00479Q96M42 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00479Q96M42 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LINC00479Q96M42 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
LINC00479Q96M42 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00479Q96M42 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00479Q96M42 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LINC00479Q96M42 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LINC00479Q96M42 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.25■□□□□ 0.35
LINC00479Q96M42 AL024507.2-201ENST00000606070 2574 ntBASIC17.25■□□□□ 0.35
LINC00479Q96M42 KRT18P10-201ENST00000388836 1287 ntBASIC17.25■□□□□ 0.35
LINC00479Q96M42 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.25■□□□□ 0.35
LINC00479Q96M42 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
LINC00479Q96M42 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00479Q96M42 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC00479Q96M42 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00479Q96M42 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.24■□□□□ 0.35
LINC00479Q96M42 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
LINC00479Q96M42 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LINC00479Q96M42 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.24■□□□□ 0.35
LINC00479Q96M42 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LINC00479Q96M42 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00479Q96M42 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00479Q96M42 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00479Q96M42 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00479Q96M42 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00479Q96M42 ABHD17AP4-201ENST00000411545 909 ntBASIC17.24■□□□□ 0.35
LINC00479Q96M42 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00479Q96M42 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00479Q96M42 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00479Q96M42 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00479Q96M42 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00479Q96M42 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00479Q96M42 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00479Q96M42 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
LINC00479Q96M42 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.24■□□□□ 0.35
LINC00479Q96M42 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00479Q96M42 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC00479Q96M42 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.24■□□□□ 0.35
LINC00479Q96M42 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms