Protein–RNA interactions for Protein: Q8TF05

PPP4R1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1Q8TF05 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.61■■□□□ 1.21
PPP4R1Q8TF05 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.61■■□□□ 1.21
PPP4R1Q8TF05 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PPP4R1Q8TF05 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.61■■□□□ 1.21
PPP4R1Q8TF05 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R1Q8TF05 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.6■■□□□ 1.21
PPP4R1Q8TF05 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R1Q8TF05 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R1Q8TF05 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
PPP4R1Q8TF05 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
PPP4R1Q8TF05 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R1Q8TF05 AC010980.1-201ENST00000587192 1142 ntBASIC22.6■■□□□ 1.21
PPP4R1Q8TF05 AL451085.2-201ENST00000605085 799 ntBASIC22.6■■□□□ 1.21
PPP4R1Q8TF05 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R1Q8TF05 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.6■■□□□ 1.21
PPP4R1Q8TF05 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R1Q8TF05 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.6■■□□□ 1.21
PPP4R1Q8TF05 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R1Q8TF05 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R1Q8TF05 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R1Q8TF05 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R1Q8TF05 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R1Q8TF05 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
PPP4R1Q8TF05 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.59■■□□□ 1.21
PPP4R1Q8TF05 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R1Q8TF05 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.59■■□□□ 1.21
PPP4R1Q8TF05 AL592295.1-201ENST00000400984 884 ntBASIC22.59■■□□□ 1.21
PPP4R1Q8TF05 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R1Q8TF05 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R1Q8TF05 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
PPP4R1Q8TF05 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R1Q8TF05 AC090877.2-201ENST00000558441 1738 ntBASIC22.59■■□□□ 1.21
PPP4R1Q8TF05 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R1Q8TF05 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R1Q8TF05 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.59■■□□□ 1.21
PPP4R1Q8TF05 AC233723.2-201ENST00000623798 2106 ntBASIC22.58■■□□□ 1.21
PPP4R1Q8TF05 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
PPP4R1Q8TF05 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PPP4R1Q8TF05 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PPP4R1Q8TF05 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PPP4R1Q8TF05 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PPP4R1Q8TF05 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PPP4R1Q8TF05 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PPP4R1Q8TF05 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PPP4R1Q8TF05 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.58■■□□□ 1.21
PPP4R1Q8TF05 AC087393.1-201ENST00000582896 145 ntBASIC22.58■■□□□ 1.21
PPP4R1Q8TF05 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PPP4R1Q8TF05 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PPP4R1Q8TF05 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.58■■□□□ 1.2
PPP4R1Q8TF05 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PPP4R1Q8TF05 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R1Q8TF05 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R1Q8TF05 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R1Q8TF05 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.57■■□□□ 1.2
PPP4R1Q8TF05 ANOS2P-203ENST00000472227 1816 ntBASIC22.57■■□□□ 1.2
PPP4R1Q8TF05 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
PPP4R1Q8TF05 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R1Q8TF05 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R1Q8TF05 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R1Q8TF05 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.57■■□□□ 1.2
PPP4R1Q8TF05 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R1Q8TF05 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
PPP4R1Q8TF05 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
PPP4R1Q8TF05 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R1Q8TF05 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R1Q8TF05 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R1Q8TF05 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PPP4R1Q8TF05 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PPP4R1Q8TF05 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PPP4R1Q8TF05 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PPP4R1Q8TF05 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.56■■□□□ 1.2
PPP4R1Q8TF05 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PPP4R1Q8TF05 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.56■■□□□ 1.2
PPP4R1Q8TF05 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.56■■□□□ 1.2
PPP4R1Q8TF05 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.56■■□□□ 1.2
PPP4R1Q8TF05 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.56■■□□□ 1.2
PPP4R1Q8TF05 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PPP4R1Q8TF05 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
PPP4R1Q8TF05 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PPP4R1Q8TF05 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
PPP4R1Q8TF05 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
PPP4R1Q8TF05 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.55■■□□□ 1.2
PPP4R1Q8TF05 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PPP4R1Q8TF05 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.55■■□□□ 1.2
PPP4R1Q8TF05 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PPP4R1Q8TF05 TRIR-205ENST00000592273 783 ntTSL 3 BASIC22.55■■□□□ 1.2
PPP4R1Q8TF05 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.55■■□□□ 1.2
PPP4R1Q8TF05 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.55■■□□□ 1.2
PPP4R1Q8TF05 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.55■■□□□ 1.2
PPP4R1Q8TF05 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PPP4R1Q8TF05 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PPP4R1Q8TF05 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
PPP4R1Q8TF05 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PPP4R1Q8TF05 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.54■■□□□ 1.2
PPP4R1Q8TF05 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.54■■□□□ 1.2
PPP4R1Q8TF05 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
PPP4R1Q8TF05 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PPP4R1Q8TF05 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
PPP4R1Q8TF05 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.54■■□□□ 1.2
PPP4R1Q8TF05 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms