Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM11BQ8TCY0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SMIM11BQ8TCY0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM11BQ8TCY0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM11BQ8TCY0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM11BQ8TCY0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
SMIM11BQ8TCY0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMIM11BQ8TCY0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC14.71□□□□□ -0.05
SMIM11BQ8TCY0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMIM11BQ8TCY0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC14.71□□□□□ -0.05
SMIM11BQ8TCY0 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC14.71□□□□□ -0.05
SMIM11BQ8TCY0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SMIM11BQ8TCY0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC14.71□□□□□ -0.05
SMIM11BQ8TCY0 AC021231.2-201ENST00000594613 730 ntBASIC14.71□□□□□ -0.05
SMIM11BQ8TCY0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMIM11BQ8TCY0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC14.71□□□□□ -0.05
SMIM11BQ8TCY0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SMIM11BQ8TCY0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SMIM11BQ8TCY0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
SMIM11BQ8TCY0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SMIM11BQ8TCY0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
SMIM11BQ8TCY0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SMIM11BQ8TCY0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM11BQ8TCY0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM11BQ8TCY0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM11BQ8TCY0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM11BQ8TCY0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC14.7□□□□□ -0.06
SMIM11BQ8TCY0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM11BQ8TCY0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM11BQ8TCY0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM11BQ8TCY0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM11BQ8TCY0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC14.7□□□□□ -0.06
SMIM11BQ8TCY0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC14.7□□□□□ -0.06
SMIM11BQ8TCY0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM11BQ8TCY0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC14.7□□□□□ -0.06
SMIM11BQ8TCY0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC14.7□□□□□ -0.06
SMIM11BQ8TCY0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC14.7□□□□□ -0.06
SMIM11BQ8TCY0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC14.7□□□□□ -0.06
SMIM11BQ8TCY0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM11BQ8TCY0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SMIM11BQ8TCY0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM11BQ8TCY0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SMIM11BQ8TCY0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SMIM11BQ8TCY0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM11BQ8TCY0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
SMIM11BQ8TCY0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM11BQ8TCY0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM11BQ8TCY0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SMIM11BQ8TCY0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC14.69□□□□□ -0.06
SMIM11BQ8TCY0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM11BQ8TCY0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM11BQ8TCY0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM11BQ8TCY0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM11BQ8TCY0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SMIM11BQ8TCY0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM11BQ8TCY0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM11BQ8TCY0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SMIM11BQ8TCY0 MED25-210ENST00000612854 801 ntTSL 5 BASIC14.68□□□□□ -0.06
SMIM11BQ8TCY0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM11BQ8TCY0 MED25-214ENST00000622402 642 ntTSL 5 BASIC14.68□□□□□ -0.06
SMIM11BQ8TCY0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC14.68□□□□□ -0.06
SMIM11BQ8TCY0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
SMIM11BQ8TCY0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
SMIM11BQ8TCY0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
SMIM11BQ8TCY0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM11BQ8TCY0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM11BQ8TCY0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM11BQ8TCY0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SMIM11BQ8TCY0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC14.67□□□□□ -0.06
SMIM11BQ8TCY0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMIM11BQ8TCY0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMIM11BQ8TCY0 BID-212ENST00000614949 1988 ntTSL 5 BASIC14.67□□□□□ -0.06
SMIM11BQ8TCY0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMIM11BQ8TCY0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMIM11BQ8TCY0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMIM11BQ8TCY0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMIM11BQ8TCY0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
SMIM11BQ8TCY0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC14.67□□□□□ -0.06
SMIM11BQ8TCY0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMIM11BQ8TCY0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC14.67□□□□□ -0.06
SMIM11BQ8TCY0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMIM11BQ8TCY0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC14.67□□□□□ -0.06
SMIM11BQ8TCY0 AC087741.3-201ENST00000624270 1347 ntBASIC14.66□□□□□ -0.06
SMIM11BQ8TCY0 ESRRAP2-201ENST00000418437 1549 ntBASIC14.66□□□□□ -0.06
SMIM11BQ8TCY0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM11BQ8TCY0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM11BQ8TCY0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC14.66□□□□□ -0.06
SMIM11BQ8TCY0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM11BQ8TCY0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC14.66□□□□□ -0.06
SMIM11BQ8TCY0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM11BQ8TCY0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM11BQ8TCY0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM11BQ8TCY0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC14.66□□□□□ -0.06
SMIM11BQ8TCY0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
SMIM11BQ8TCY0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SMIM11BQ8TCY0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMIM11BQ8TCY0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM11BQ8TCY0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC14.65□□□□□ -0.06
SMIM11BQ8TCY0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMIM11BQ8TCY0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms