Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SHCBP1Q8NEM2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
SHCBP1Q8NEM2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.99■■□□□ 1.75
SHCBP1Q8NEM2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SHCBP1Q8NEM2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.99■■□□□ 1.75
SHCBP1Q8NEM2 GRAMD4P2-201ENST00000423297 1097 ntBASIC25.99■■□□□ 1.75
SHCBP1Q8NEM2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.99■■□□□ 1.75
SHCBP1Q8NEM2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
SHCBP1Q8NEM2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SHCBP1Q8NEM2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
SHCBP1Q8NEM2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.98■■□□□ 1.75
SHCBP1Q8NEM2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
SHCBP1Q8NEM2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SHCBP1Q8NEM2 AK1-201ENST00000223836 736 ntTSL 3 BASIC25.98■■□□□ 1.75
SHCBP1Q8NEM2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SHCBP1Q8NEM2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.98■■□□□ 1.75
SHCBP1Q8NEM2 pRNA.6-201ENST00000610482 90 ntBASIC25.98■■□□□ 1.75
SHCBP1Q8NEM2 pRNA.5-201ENST00000612139 90 ntBASIC25.98■■□□□ 1.75
SHCBP1Q8NEM2 pRNA.11-201ENST00000618423 90 ntBASIC25.98■■□□□ 1.75
SHCBP1Q8NEM2 pRNA.13-201ENST00000619112 90 ntBASIC25.98■■□□□ 1.75
SHCBP1Q8NEM2 ALDH1A3-203ENST00000557963 1670 ntBASIC25.98■■□□□ 1.75
SHCBP1Q8NEM2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SHCBP1Q8NEM2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
SHCBP1Q8NEM2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
SHCBP1Q8NEM2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SHCBP1Q8NEM2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.97■■□□□ 1.75
SHCBP1Q8NEM2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC25.97■■□□□ 1.75
SHCBP1Q8NEM2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC25.97■■□□□ 1.75
SHCBP1Q8NEM2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SHCBP1Q8NEM2 AC141586.4-201ENST00000624558 1573 ntBASIC25.96■■□□□ 1.75
SHCBP1Q8NEM2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.96■■□□□ 1.75
SHCBP1Q8NEM2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SHCBP1Q8NEM2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
SHCBP1Q8NEM2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.75
SHCBP1Q8NEM2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
SHCBP1Q8NEM2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SHCBP1Q8NEM2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
SHCBP1Q8NEM2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.95■■□□□ 1.74
SHCBP1Q8NEM2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC25.95■■□□□ 1.74
SHCBP1Q8NEM2 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.95■■□□□ 1.74
SHCBP1Q8NEM2 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SHCBP1Q8NEM2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SHCBP1Q8NEM2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SHCBP1Q8NEM2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SHCBP1Q8NEM2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SHCBP1Q8NEM2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SHCBP1Q8NEM2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
SHCBP1Q8NEM2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
SHCBP1Q8NEM2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.94■■□□□ 1.74
SHCBP1Q8NEM2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SHCBP1Q8NEM2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.93■■□□□ 1.74
SHCBP1Q8NEM2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SHCBP1Q8NEM2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SHCBP1Q8NEM2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
SHCBP1Q8NEM2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.93■■□□□ 1.74
SHCBP1Q8NEM2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
SHCBP1Q8NEM2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.93■■□□□ 1.74
SHCBP1Q8NEM2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SHCBP1Q8NEM2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SHCBP1Q8NEM2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SHCBP1Q8NEM2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.92■■□□□ 1.74
SHCBP1Q8NEM2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC25.92■■□□□ 1.74
SHCBP1Q8NEM2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC25.91■■□□□ 1.74
SHCBP1Q8NEM2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.91■■□□□ 1.74
SHCBP1Q8NEM2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.91■■□□□ 1.74
SHCBP1Q8NEM2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SHCBP1Q8NEM2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SHCBP1Q8NEM2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SHCBP1Q8NEM2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC25.91■■□□□ 1.74
SHCBP1Q8NEM2 AC126544.1-201ENST00000580842 1059 ntBASIC25.91■■□□□ 1.74
SHCBP1Q8NEM2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC25.91■■□□□ 1.74
SHCBP1Q8NEM2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SHCBP1Q8NEM2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SHCBP1Q8NEM2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.91■■□□□ 1.74
SHCBP1Q8NEM2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SHCBP1Q8NEM2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.91■■□□□ 1.74
SHCBP1Q8NEM2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SHCBP1Q8NEM2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
SHCBP1Q8NEM2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.9■■□□□ 1.74
SHCBP1Q8NEM2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SHCBP1Q8NEM2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.9■■□□□ 1.74
SHCBP1Q8NEM2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SHCBP1Q8NEM2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SHCBP1Q8NEM2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SHCBP1Q8NEM2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.89■■□□□ 1.74
SHCBP1Q8NEM2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.89■■□□□ 1.74
SHCBP1Q8NEM2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SHCBP1Q8NEM2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.89■■□□□ 1.74
SHCBP1Q8NEM2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SHCBP1Q8NEM2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
SHCBP1Q8NEM2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.89■■□□□ 1.73
SHCBP1Q8NEM2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.89■■□□□ 1.73
SHCBP1Q8NEM2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
SHCBP1Q8NEM2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.88■■□□□ 1.73
SHCBP1Q8NEM2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.88■■□□□ 1.73
SHCBP1Q8NEM2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.88■■□□□ 1.73
SHCBP1Q8NEM2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
SHCBP1Q8NEM2 SLC47A1P1-202ENST00000449666 945 ntBASIC25.88■■□□□ 1.73
SHCBP1Q8NEM2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC25.88■■□□□ 1.73
SHCBP1Q8NEM2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.87■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms