Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.61■■□□□ 1.05
SRFBP1Q8NEF9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SRFBP1Q8NEF9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SRFBP1Q8NEF9 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRFBP1Q8NEF9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SRFBP1Q8NEF9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRFBP1Q8NEF9 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRFBP1Q8NEF9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SRFBP1Q8NEF9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.6■■□□□ 1.05
SRFBP1Q8NEF9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRFBP1Q8NEF9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRFBP1Q8NEF9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SRFBP1Q8NEF9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.59■■□□□ 1.05
SRFBP1Q8NEF9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SRFBP1Q8NEF9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SRFBP1Q8NEF9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SRFBP1Q8NEF9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SRFBP1Q8NEF9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
SRFBP1Q8NEF9 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SRFBP1Q8NEF9 GUSBP5-201ENST00000418136 578 ntBASIC21.58■■□□□ 1.05
SRFBP1Q8NEF9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.58■■□□□ 1.05
SRFBP1Q8NEF9 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SRFBP1Q8NEF9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
SRFBP1Q8NEF9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
SRFBP1Q8NEF9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
SRFBP1Q8NEF9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.58■■□□□ 1.04
SRFBP1Q8NEF9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SRFBP1Q8NEF9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SRFBP1Q8NEF9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SRFBP1Q8NEF9 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SRFBP1Q8NEF9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
SRFBP1Q8NEF9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SRFBP1Q8NEF9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SRFBP1Q8NEF9 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SRFBP1Q8NEF9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
SRFBP1Q8NEF9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
SRFBP1Q8NEF9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.57■■□□□ 1.04
SRFBP1Q8NEF9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.57■■□□□ 1.04
SRFBP1Q8NEF9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SRFBP1Q8NEF9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.57■■□□□ 1.04
SRFBP1Q8NEF9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SRFBP1Q8NEF9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SRFBP1Q8NEF9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SRFBP1Q8NEF9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SRFBP1Q8NEF9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SRFBP1Q8NEF9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
SRFBP1Q8NEF9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SRFBP1Q8NEF9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SRFBP1Q8NEF9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SRFBP1Q8NEF9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SRFBP1Q8NEF9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SRFBP1Q8NEF9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SRFBP1Q8NEF9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SRFBP1Q8NEF9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRFBP1Q8NEF9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SRFBP1Q8NEF9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRFBP1Q8NEF9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRFBP1Q8NEF9 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.55■■□□□ 1.04
SRFBP1Q8NEF9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
SRFBP1Q8NEF9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRFBP1Q8NEF9 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SRFBP1Q8NEF9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRFBP1Q8NEF9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SRFBP1Q8NEF9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.55■■□□□ 1.04
SRFBP1Q8NEF9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRFBP1Q8NEF9 UNC93B8-201ENST00000511903 705 ntBASIC21.55■■□□□ 1.04
SRFBP1Q8NEF9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.55■■□□□ 1.04
SRFBP1Q8NEF9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRFBP1Q8NEF9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRFBP1Q8NEF9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.55■■□□□ 1.04
SRFBP1Q8NEF9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SRFBP1Q8NEF9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.54■■□□□ 1.04
SRFBP1Q8NEF9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SRFBP1Q8NEF9 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SRFBP1Q8NEF9 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.54■■□□□ 1.04
SRFBP1Q8NEF9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.54■■□□□ 1.04
SRFBP1Q8NEF9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SRFBP1Q8NEF9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.54■■□□□ 1.04
SRFBP1Q8NEF9 MIR6724-1-201ENST00000616420 92 ntBASIC21.54■■□□□ 1.04
SRFBP1Q8NEF9 MIR6724-2-201ENST00000616483 92 ntBASIC21.54■■□□□ 1.04
SRFBP1Q8NEF9 MIR6724-4-201ENST00000617390 92 ntBASIC21.54■■□□□ 1.04
SRFBP1Q8NEF9 MIR6724-3-201ENST00000622482 92 ntBASIC21.54■■□□□ 1.04
SRFBP1Q8NEF9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SRFBP1Q8NEF9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SRFBP1Q8NEF9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.54■■□□□ 1.04
SRFBP1Q8NEF9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SRFBP1Q8NEF9 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.53■■□□□ 1.04
SRFBP1Q8NEF9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.53■■□□□ 1.04
SRFBP1Q8NEF9 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SRFBP1Q8NEF9 KRT16P3-201ENST00000439127 1283 ntBASIC21.53■■□□□ 1.04
SRFBP1Q8NEF9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
SRFBP1Q8NEF9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
SRFBP1Q8NEF9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SRFBP1Q8NEF9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SRFBP1Q8NEF9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.52■■□□□ 1.04
SRFBP1Q8NEF9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.52■■□□□ 1.04
SRFBP1Q8NEF9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SRFBP1Q8NEF9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.52■■□□□ 1.04
SRFBP1Q8NEF9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SRFBP1Q8NEF9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms