Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPEB3Q8NE35 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CPEB3Q8NE35 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CPEB3Q8NE35 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.82■□□□□ 0.76
CPEB3Q8NE35 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.82■□□□□ 0.76
CPEB3Q8NE35 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
CPEB3Q8NE35 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CPEB3Q8NE35 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CPEB3Q8NE35 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPEB3Q8NE35 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPEB3Q8NE35 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPEB3Q8NE35 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPEB3Q8NE35 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.81■□□□□ 0.76
CPEB3Q8NE35 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.81■□□□□ 0.76
CPEB3Q8NE35 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.81■□□□□ 0.76
CPEB3Q8NE35 MTDHP2-201ENST00000601468 714 ntBASIC19.81■□□□□ 0.76
CPEB3Q8NE35 AC010997.5-201ENST00000609182 354 ntBASIC19.81■□□□□ 0.76
CPEB3Q8NE35 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPEB3Q8NE35 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPEB3Q8NE35 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.81■□□□□ 0.76
CPEB3Q8NE35 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CPEB3Q8NE35 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPEB3Q8NE35 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CPEB3Q8NE35 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.8■□□□□ 0.76
CPEB3Q8NE35 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPEB3Q8NE35 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CPEB3Q8NE35 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPEB3Q8NE35 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPEB3Q8NE35 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPEB3Q8NE35 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.79■□□□□ 0.76
CPEB3Q8NE35 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPEB3Q8NE35 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CPEB3Q8NE35 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CPEB3Q8NE35 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
CPEB3Q8NE35 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPEB3Q8NE35 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPEB3Q8NE35 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
CPEB3Q8NE35 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.79■□□□□ 0.76
CPEB3Q8NE35 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.79■□□□□ 0.76
CPEB3Q8NE35 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.79■□□□□ 0.76
CPEB3Q8NE35 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CPEB3Q8NE35 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPEB3Q8NE35 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPEB3Q8NE35 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CPEB3Q8NE35 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CPEB3Q8NE35 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CPEB3Q8NE35 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPEB3Q8NE35 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CPEB3Q8NE35 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPEB3Q8NE35 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPEB3Q8NE35 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPEB3Q8NE35 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPEB3Q8NE35 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.78■□□□□ 0.76
CPEB3Q8NE35 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.78■□□□□ 0.76
CPEB3Q8NE35 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.78■□□□□ 0.76
CPEB3Q8NE35 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.78■□□□□ 0.76
CPEB3Q8NE35 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPEB3Q8NE35 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.78■□□□□ 0.76
CPEB3Q8NE35 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CPEB3Q8NE35 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.77■□□□□ 0.76
CPEB3Q8NE35 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CPEB3Q8NE35 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CPEB3Q8NE35 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPEB3Q8NE35 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.77■□□□□ 0.76
CPEB3Q8NE35 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPEB3Q8NE35 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPEB3Q8NE35 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPEB3Q8NE35 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CPEB3Q8NE35 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CPEB3Q8NE35 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.76■□□□□ 0.75
CPEB3Q8NE35 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPEB3Q8NE35 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPEB3Q8NE35 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPEB3Q8NE35 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.76■□□□□ 0.75
CPEB3Q8NE35 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CPEB3Q8NE35 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CPEB3Q8NE35 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.76■□□□□ 0.75
CPEB3Q8NE35 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPEB3Q8NE35 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPEB3Q8NE35 AC005703.6-201ENST00000623265 1329 ntBASIC19.76■□□□□ 0.75
CPEB3Q8NE35 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.75■□□□□ 0.75
CPEB3Q8NE35 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPEB3Q8NE35 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPEB3Q8NE35 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPEB3Q8NE35 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPEB3Q8NE35 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPEB3Q8NE35 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPEB3Q8NE35 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPEB3Q8NE35 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CPEB3Q8NE35 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.74■□□□□ 0.75
CPEB3Q8NE35 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPEB3Q8NE35 KRT16P3-201ENST00000439127 1283 ntBASIC19.74■□□□□ 0.75
CPEB3Q8NE35 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.74■□□□□ 0.75
CPEB3Q8NE35 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.74■□□□□ 0.75
CPEB3Q8NE35 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CPEB3Q8NE35 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CPEB3Q8NE35 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CPEB3Q8NE35 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.74■□□□□ 0.75
CPEB3Q8NE35 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPEB3Q8NE35 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms