Protein–RNA interactions for Protein: Q8ND25

ZNRF1, E3 ubiquitin-protein ligase ZNRF1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1Q8ND25 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.97■□□□□ 0.63
ZNRF1Q8ND25 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZNRF1Q8ND25 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
ZNRF1Q8ND25 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
ZNRF1Q8ND25 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNRF1Q8ND25 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZNRF1Q8ND25 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
ZNRF1Q8ND25 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.97■□□□□ 0.63
ZNRF1Q8ND25 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
ZNRF1Q8ND25 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNRF1Q8ND25 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNRF1Q8ND25 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNRF1Q8ND25 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ZNRF1Q8ND25 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNRF1Q8ND25 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNRF1Q8ND25 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNRF1Q8ND25 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.95■□□□□ 0.62
ZNRF1Q8ND25 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.95■□□□□ 0.62
ZNRF1Q8ND25 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.95■□□□□ 0.62
ZNRF1Q8ND25 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.95■□□□□ 0.62
ZNRF1Q8ND25 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.95■□□□□ 0.62
ZNRF1Q8ND25 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.95■□□□□ 0.62
ZNRF1Q8ND25 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.95■□□□□ 0.62
ZNRF1Q8ND25 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ZNRF1Q8ND25 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNRF1Q8ND25 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ZNRF1Q8ND25 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNRF1Q8ND25 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZNRF1Q8ND25 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZNRF1Q8ND25 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.94■□□□□ 0.62
ZNRF1Q8ND25 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNRF1Q8ND25 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNRF1Q8ND25 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNRF1Q8ND25 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.94■□□□□ 0.62
ZNRF1Q8ND25 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNRF1Q8ND25 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
ZNRF1Q8ND25 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.94■□□□□ 0.62
ZNRF1Q8ND25 AC005703.6-201ENST00000623265 1329 ntBASIC18.94■□□□□ 0.62
ZNRF1Q8ND25 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNRF1Q8ND25 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNRF1Q8ND25 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNRF1Q8ND25 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNRF1Q8ND25 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNRF1Q8ND25 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNRF1Q8ND25 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.93■□□□□ 0.62
ZNRF1Q8ND25 KRT16P3-201ENST00000439127 1283 ntBASIC18.93■□□□□ 0.62
ZNRF1Q8ND25 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNRF1Q8ND25 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ZNRF1Q8ND25 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ZNRF1Q8ND25 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ZNRF1Q8ND25 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNRF1Q8ND25 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNRF1Q8ND25 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNRF1Q8ND25 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.92■□□□□ 0.62
ZNRF1Q8ND25 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.92■□□□□ 0.62
ZNRF1Q8ND25 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNRF1Q8ND25 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNRF1Q8ND25 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ZNRF1Q8ND25 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.92■□□□□ 0.62
ZNRF1Q8ND25 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNRF1Q8ND25 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNRF1Q8ND25 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZNRF1Q8ND25 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
ZNRF1Q8ND25 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNRF1Q8ND25 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNRF1Q8ND25 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZNRF1Q8ND25 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNRF1Q8ND25 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNRF1Q8ND25 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNRF1Q8ND25 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.9■□□□□ 0.62
ZNRF1Q8ND25 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ZNRF1Q8ND25 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNRF1Q8ND25 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNRF1Q8ND25 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNRF1Q8ND25 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ZNRF1Q8ND25 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.9■□□□□ 0.62
ZNRF1Q8ND25 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNRF1Q8ND25 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNRF1Q8ND25 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.9■□□□□ 0.62
ZNRF1Q8ND25 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.9■□□□□ 0.62
ZNRF1Q8ND25 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ZNRF1Q8ND25 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNRF1Q8ND25 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNRF1Q8ND25 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNRF1Q8ND25 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ZNRF1Q8ND25 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
ZNRF1Q8ND25 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
ZNRF1Q8ND25 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
ZNRF1Q8ND25 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
ZNRF1Q8ND25 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNRF1Q8ND25 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNRF1Q8ND25 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNRF1Q8ND25 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.89■□□□□ 0.61
ZNRF1Q8ND25 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNRF1Q8ND25 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNRF1Q8ND25 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
ZNRF1Q8ND25 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.89■□□□□ 0.61
ZNRF1Q8ND25 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
ZNRF1Q8ND25 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
ZNRF1Q8ND25 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms