Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
TMEM88Q6PEY1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TMEM88Q6PEY1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM88Q6PEY1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM88Q6PEY1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM88Q6PEY1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM88Q6PEY1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.2■□□□□ 0.5
TMEM88Q6PEY1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM88Q6PEY1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM88Q6PEY1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM88Q6PEY1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM88Q6PEY1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.2■□□□□ 0.5
TMEM88Q6PEY1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM88Q6PEY1 SLC6A10P-202ENST00000431994 2058 ntBASIC18.19■□□□□ 0.5
TMEM88Q6PEY1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM88Q6PEY1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM88Q6PEY1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM88Q6PEY1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM88Q6PEY1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM88Q6PEY1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.19■□□□□ 0.5
TMEM88Q6PEY1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM88Q6PEY1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM88Q6PEY1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TMEM88Q6PEY1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TMEM88Q6PEY1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM88Q6PEY1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM88Q6PEY1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM88Q6PEY1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM88Q6PEY1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TMEM88Q6PEY1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
TMEM88Q6PEY1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.18■□□□□ 0.5
TMEM88Q6PEY1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM88Q6PEY1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM88Q6PEY1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM88Q6PEY1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.18■□□□□ 0.5
TMEM88Q6PEY1 LINC00273-201ENST00000539813 1452 ntBASIC18.18■□□□□ 0.5
TMEM88Q6PEY1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM88Q6PEY1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM88Q6PEY1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM88Q6PEY1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM88Q6PEY1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TMEM88Q6PEY1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TMEM88Q6PEY1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM88Q6PEY1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM88Q6PEY1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TMEM88Q6PEY1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM88Q6PEY1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TMEM88Q6PEY1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM88Q6PEY1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TMEM88Q6PEY1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.17■□□□□ 0.5
TMEM88Q6PEY1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.17■□□□□ 0.5
TMEM88Q6PEY1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TMEM88Q6PEY1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM88Q6PEY1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM88Q6PEY1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88Q6PEY1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88Q6PEY1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88Q6PEY1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.16■□□□□ 0.5
TMEM88Q6PEY1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.16■□□□□ 0.5
TMEM88Q6PEY1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TMEM88Q6PEY1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.16■□□□□ 0.5
TMEM88Q6PEY1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88Q6PEY1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88Q6PEY1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEM88Q6PEY1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.16■□□□□ 0.5
TMEM88Q6PEY1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEM88Q6PEY1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.16■□□□□ 0.5
TMEM88Q6PEY1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88Q6PEY1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88Q6PEY1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.16■□□□□ 0.5
TMEM88Q6PEY1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88Q6PEY1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88Q6PEY1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TMEM88Q6PEY1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEM88Q6PEY1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM88Q6PEY1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.16■□□□□ 0.5
TMEM88Q6PEY1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEM88Q6PEY1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TMEM88Q6PEY1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
TMEM88Q6PEY1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM88Q6PEY1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.15■□□□□ 0.5
TMEM88Q6PEY1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM88Q6PEY1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM88Q6PEY1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM88Q6PEY1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM88Q6PEY1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM88Q6PEY1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC18.15■□□□□ 0.5
TMEM88Q6PEY1 MIR3648-2-201ENST00000581792 180 ntBASIC18.15■□□□□ 0.5
TMEM88Q6PEY1 MIR3648-1-201ENST00000615959 180 ntBASIC18.15■□□□□ 0.5
TMEM88Q6PEY1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TMEM88Q6PEY1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM88Q6PEY1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM88Q6PEY1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM88Q6PEY1 AC007952.6-201ENST00000573168 2673 ntBASIC18.15■□□□□ 0.5
TMEM88Q6PEY1 AC003957.1-201ENST00000625108 2673 ntBASIC18.15■□□□□ 0.5
TMEM88Q6PEY1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM88Q6PEY1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.14■□□□□ 0.5
TMEM88Q6PEY1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.14■□□□□ 0.5
TMEM88Q6PEY1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TMEM88Q6PEY1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms