Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC26.26■■□□□ 1.79
COL13A1Q5TAT6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL13A1Q5TAT6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC26.26■■□□□ 1.79
COL13A1Q5TAT6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC26.26■■□□□ 1.79
COL13A1Q5TAT6 AC009086.3-201ENST00000623486 1008 ntBASIC26.26■■□□□ 1.79
COL13A1Q5TAT6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL13A1Q5TAT6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL13A1Q5TAT6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL13A1Q5TAT6 C17orf82-201ENST00000623772 1530 ntBASIC26.25■■□□□ 1.79
COL13A1Q5TAT6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL13A1Q5TAT6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL13A1Q5TAT6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC26.25■■□□□ 1.79
COL13A1Q5TAT6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL13A1Q5TAT6 SLC29A4P1-201ENST00000398760 971 ntBASIC26.25■■□□□ 1.79
COL13A1Q5TAT6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
COL13A1Q5TAT6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC26.25■■□□□ 1.79
COL13A1Q5TAT6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC26.25■■□□□ 1.79
COL13A1Q5TAT6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
COL13A1Q5TAT6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL13A1Q5TAT6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
COL13A1Q5TAT6 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
COL13A1Q5TAT6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC26.24■■□□□ 1.79
COL13A1Q5TAT6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL13A1Q5TAT6 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.24■■□□□ 1.79
COL13A1Q5TAT6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL13A1Q5TAT6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
COL13A1Q5TAT6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
COL13A1Q5TAT6 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.23■■□□□ 1.79
COL13A1Q5TAT6 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.23■■□□□ 1.79
COL13A1Q5TAT6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.23■■□□□ 1.79
COL13A1Q5TAT6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC26.23■■□□□ 1.79
COL13A1Q5TAT6 COX20-201ENST00000366528 568 ntTSL 2 BASIC26.23■■□□□ 1.79
COL13A1Q5TAT6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
COL13A1Q5TAT6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
COL13A1Q5TAT6 AL158047.1-201ENST00000445918 881 ntBASIC26.23■■□□□ 1.79
COL13A1Q5TAT6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
COL13A1Q5TAT6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL13A1Q5TAT6 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL13A1Q5TAT6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
COL13A1Q5TAT6 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
COL13A1Q5TAT6 AC004854.2-201ENST00000608450 1441 ntBASIC26.22■■□□□ 1.79
COL13A1Q5TAT6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
COL13A1Q5TAT6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC26.22■■□□□ 1.79
COL13A1Q5TAT6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
COL13A1Q5TAT6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
COL13A1Q5TAT6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
COL13A1Q5TAT6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL13A1Q5TAT6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL13A1Q5TAT6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
COL13A1Q5TAT6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC26.21■■□□□ 1.79
COL13A1Q5TAT6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
COL13A1Q5TAT6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
COL13A1Q5TAT6 KRT18P21-201ENST00000515767 1272 ntBASIC26.21■■□□□ 1.79
COL13A1Q5TAT6 RNA5SP413-201ENST00000516373 109 ntBASIC26.21■■□□□ 1.79
COL13A1Q5TAT6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC26.21■■□□□ 1.79
COL13A1Q5TAT6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL13A1Q5TAT6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
COL13A1Q5TAT6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC26.2■■□□□ 1.78
COL13A1Q5TAT6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC26.2■■□□□ 1.78
COL13A1Q5TAT6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.78
COL13A1Q5TAT6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC26.2■■□□□ 1.78
COL13A1Q5TAT6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
COL13A1Q5TAT6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC26.2■■□□□ 1.78
COL13A1Q5TAT6 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.2■■□□□ 1.78
COL13A1Q5TAT6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
COL13A1Q5TAT6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
COL13A1Q5TAT6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
COL13A1Q5TAT6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
COL13A1Q5TAT6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC26.19■■□□□ 1.78
COL13A1Q5TAT6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC26.19■■□□□ 1.78
COL13A1Q5TAT6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC26.19■■□□□ 1.78
COL13A1Q5TAT6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
COL13A1Q5TAT6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.19■■□□□ 1.78
COL13A1Q5TAT6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
COL13A1Q5TAT6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL13A1Q5TAT6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC26.18■■□□□ 1.78
COL13A1Q5TAT6 AC211429.1-201ENST00000415277 523 ntBASIC26.18■■□□□ 1.78
COL13A1Q5TAT6 AC073210.2-201ENST00000430369 194 ntBASIC26.18■■□□□ 1.78
COL13A1Q5TAT6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL13A1Q5TAT6 AC098934.4-201ENST00000564127 592 ntBASIC26.18■■□□□ 1.78
COL13A1Q5TAT6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC26.18■■□□□ 1.78
COL13A1Q5TAT6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC26.18■■□□□ 1.78
COL13A1Q5TAT6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
COL13A1Q5TAT6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
COL13A1Q5TAT6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
COL13A1Q5TAT6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
COL13A1Q5TAT6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
COL13A1Q5TAT6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC26.17■■□□□ 1.78
COL13A1Q5TAT6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC26.17■■□□□ 1.78
COL13A1Q5TAT6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC26.17■■□□□ 1.78
COL13A1Q5TAT6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL13A1Q5TAT6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
COL13A1Q5TAT6 AC092118.2-201ENST00000613495 667 ntBASIC26.17■■□□□ 1.78
COL13A1Q5TAT6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC26.17■■□□□ 1.78
COL13A1Q5TAT6 AC090877.2-201ENST00000558441 1738 ntBASIC26.17■■□□□ 1.78
COL13A1Q5TAT6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL13A1Q5TAT6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC26.16■■□□□ 1.78
COL13A1Q5TAT6 AC073912.3-201ENST00000624414 853 ntBASIC26.16■■□□□ 1.78
COL13A1Q5TAT6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
COL13A1Q5TAT6 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms