Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 CCDC40-203ENST00000374877 3544 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.688e-6■■■■■ 27.9
DDX59Q5T1V6 FLOT2-203ENST00000465427 746 ntTSL 510.75□□□□□ -0.698e-6■■■■■ 27.9
DDX59Q5T1V6 NAPA-204ENST00000593905 548 ntTSL 310.66□□□□□ -0.78e-6■■■■■ 27.9
DDX59Q5T1V6 CD99P1-201ENST00000414513 3071 ntTSL 210.62□□□□□ -0.718e-6■■■■■ 27.9
DDX59Q5T1V6 CCDC40-204ENST00000397545 4294 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.738e-6■■■■■ 27.9
DDX59Q5T1V6 GTF3C5-206ENST00000439697 823 ntTSL 310.32□□□□□ -0.768e-6■■■■■ 27.9
DDX59Q5T1V6 ZRANB3-205ENST00000452187 1269 ntTSL 510.23□□□□□ -0.778e-6■■■■■ 27.9
DDX59Q5T1V6 AC105036.3-201ENST00000566032 583 ntTSL 210.22□□□□□ -0.778e-6■■■■■ 27.9
DDX59Q5T1V6 POGZ-219ENST00000533351 586 ntTSL 510.1□□□□□ -0.798e-6■■■■■ 27.9
DDX59Q5T1V6 TBC1D9B-219ENST00000524222 927 ntTSL 59.89□□□□□ -0.838e-6■■■■■ 27.9
DDX59Q5T1V6 CCDC40-212ENST00000574799 3795 ntTSL 1 (best)9.58□□□□□ -0.888e-6■■■■■ 27.9
DDX59Q5T1V6 HM13-224ENST00000498035 3932 ntTSL 2 BASIC8.66□□□□□ -1.028e-6■■■■■ 27.9
DDX59Q5T1V6 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.088e-6■■■■■ 27.9
DDX59Q5T1V6 TMEM184B-203ENST00000403210 586 ntTSL 58.27□□□□□ -1.098e-6■■■■■ 27.9
DDX59Q5T1V6 POGZ-203ENST00000368863 6054 ntTSL 1 (best) BASIC8.27□□□□□ -1.098e-6■■■■■ 27.9
DDX59Q5T1V6 ZRANB3-208ENST00000492193 546 ntTSL 38.25□□□□□ -1.098e-6■■■■■ 27.9
DDX59Q5T1V6 POGZ-209ENST00000467287 649 ntTSL 48.08□□□□□ -1.128e-6■■■■■ 27.9
DDX59Q5T1V6 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC8.06□□□□□ -1.128e-6■■■■■ 27.9
DDX59Q5T1V6 CD99P1-202ENST00000430562 984 ntTSL 1 (best)8.04□□□□□ -1.128e-6■■■■■ 27.9
DDX59Q5T1V6 SSBP4-208ENST00000600628 550 ntTSL 37.97□□□□□ -1.138e-6■■■■■ 27.9
DDX59Q5T1V6 NAPA-206ENST00000594155 416 ntTSL 57.12□□□□□ -1.278e-6■■■■■ 27.9
DDX59Q5T1V6 POGZ-212ENST00000485040 2741 ntTSL 1 (best)7.11□□□□□ -1.278e-6■■■■■ 27.9
DDX59Q5T1V6 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.278e-6■■■■■ 27.9
DDX59Q5T1V6 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.328e-6■■■■■ 27.9
DDX59Q5T1V6 POGZ-210ENST00000476128 397 ntTSL 56.8□□□□□ -1.328e-6■■■■■ 27.9
DDX59Q5T1V6 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.78□□□□□ -1.328e-6■■■■■ 27.9
DDX59Q5T1V6 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.77□□□□□ -1.338e-6■■■■■ 27.9
DDX59Q5T1V6 NAPA-218ENST00000598615 379 ntTSL 36.12□□□□□ -1.438e-6■■■■■ 27.9
DDX59Q5T1V6 POGZ-202ENST00000358476 6459 ntTSL 26□□□□□ -1.458e-6■■■■■ 27.9
DDX59Q5T1V6 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.98□□□□□ -1.458e-6■■■■■ 27.9
DDX59Q5T1V6 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.6□□□□□ -1.518e-6■■■■■ 27.9
DDX59Q5T1V6 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.528e-6■■■■■ 27.9
DDX59Q5T1V6 ZRANB3-203ENST00000403017 4130 ntTSL 55.46□□□□□ -1.548e-6■■■■■ 27.9
DDX59Q5T1V6 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.68e-6■■■■■ 27.9
DDX59Q5T1V6 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.678e-6■■■■■ 27.9
DDX59Q5T1V6 FANCD2-204ENST00000421731 3425 ntTSL 1 (best)4.24□□□□□ -1.738e-6■■■■■ 27.9
DDX59Q5T1V6 SCAMP1-205ENST00000614488 1276 ntTSL 1 (best)3.93□□□□□ -1.788e-6■■■■■ 27.9
DDX59Q5T1V6 SCAMP1-201ENST00000320280 3766 ntTSL 33□□□□□ -1.938e-6■■■■■ 27.9
DDX59Q5T1V6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.612e-6■■■■■ 27.8
DDX59Q5T1V6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.512e-6■■■■■ 27.8
DDX59Q5T1V6 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.444e-9■■■■■ 27.8
DDX59Q5T1V6 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.441e-6■■■■■ 27.8
DDX59Q5T1V6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.373e-7■■■■■ 27.8
DDX59Q5T1V6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.13e-7■■■■■ 27.8
DDX59Q5T1V6 PDE3B-205ENST00000534317 5521 ntTSL 1 (best)18.44■□□□□ 0.548e-7■■■■■ 27.8
DDX59Q5T1V6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.418e-7■■■■■ 27.8
DDX59Q5T1V6 LAMA5-212ENST00000495695 780 ntTSL 217.49■□□□□ 0.398e-7■■■■■ 27.8
DDX59Q5T1V6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.38e-7■■■■■ 27.8
DDX59Q5T1V6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.55■□□□□ 0.088e-7■■■■■ 27.8
DDX59Q5T1V6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.29■□□□□ 0.048e-7■■■■■ 27.8
DDX59Q5T1V6 CCNY-209ENST00000493157 816 ntTSL 515.29■□□□□ 0.048e-7■■■■■ 27.8
DDX59Q5T1V6 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.088e-7■■■■■ 27.8
DDX59Q5T1V6 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.088e-7■■■■■ 27.8
DDX59Q5T1V6 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.99□□□□□ -0.178e-7■■■■■ 27.8
DDX59Q5T1V6 LAMA5-203ENST00000370691 3160 ntTSL 1 (best)13.78□□□□□ -0.28e-7■■■■■ 27.8
DDX59Q5T1V6 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.51□□□□□ -0.258e-7■■■■■ 27.8
DDX59Q5T1V6 CCNY-207ENST00000490012 793 ntTSL 313.48□□□□□ -0.258e-7■■■■■ 27.8
DDX59Q5T1V6 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.348e-7■■■■■ 27.8
DDX59Q5T1V6 CFAP43-204ENST00000369720 2876 ntTSL 1 (best) BASIC12.05□□□□□ -0.488e-7■■■■■ 27.8
DDX59Q5T1V6 CFAP43-202ENST00000357060 5365 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.748e-7■■■■■ 27.8
DDX59Q5T1V6 CCNY-204ENST00000374706 3940 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.88e-7■■■■■ 27.8
DDX59Q5T1V6 LEMD1-211ENST00000629624 576 ntTSL 49.9□□□□□ -0.828e-7■■■■■ 27.8
DDX59Q5T1V6 CCNY-208ENST00000492478 809 ntTSL 58.35□□□□□ -1.078e-7■■■■■ 27.8
DDX59Q5T1V6 ARHGEF1-215ENST00000598444 425 ntTSL 27.92□□□□□ -1.148e-7■■■■■ 27.8
DDX59Q5T1V6 LEMD1-209ENST00000625854 516 ntTSL 47.83□□□□□ -1.168e-7■■■■■ 27.8
DDX59Q5T1V6 HOXC10-205ENST00000515593 526 ntTSL 47.69□□□□□ -1.188e-7■■■■■ 27.8
DDX59Q5T1V6 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.278e-7■■■■■ 27.8
DDX59Q5T1V6 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC6.98□□□□□ -1.298e-7■■■■■ 27.8
DDX59Q5T1V6 NDUFAF2-202ENST00000502658 461 ntTSL 1 (best)4.57□□□□□ -1.688e-7■■■■■ 27.8
DDX59Q5T1V6 TIMM9-204ENST00000555097 377 ntTSL 54.3□□□□□ -1.728e-7■■■■■ 27.8
DDX59Q5T1V6 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.758e-7■■■■■ 27.8
DDX59Q5T1V6 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.93□□□□□ -1.788e-7■■■■■ 27.8
DDX59Q5T1V6 TIMM9-201ENST00000216463 1075 ntTSL 33.6□□□□□ -1.838e-7■■■■■ 27.8
DDX59Q5T1V6 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.26□□□□□ -1.898e-7■■■■■ 27.8
DDX59Q5T1V6 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.12□□□□□ -1.918e-7■■■■■ 27.8
DDX59Q5T1V6 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.978e-7■■■■■ 27.8
DDX59Q5T1V6 TIMM9-210ENST00000557397 571 ntTSL 42.63□□□□□ -1.998e-7■■■■■ 27.8
DDX59Q5T1V6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.372e-6■■■■■ 27.8
DDX59Q5T1V6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.292e-6■■■■■ 27.8
DDX59Q5T1V6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.222e-6■■■■■ 27.8
DDX59Q5T1V6 C8orf58-203ENST00000453427 953 ntTSL 318.96■□□□□ 0.632e-6■■■■■ 27.8
DDX59Q5T1V6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.632e-6■■■■■ 27.7
DDX59Q5T1V6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.622e-6■■■■■ 27.7
DDX59Q5T1V6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.68■□□□□ 0.422e-6■■■■■ 27.7
DDX59Q5T1V6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.092e-7■■■■■ 27.6
DDX59Q5T1V6 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.092e-7■■■■■ 27.6
DDX59Q5T1V6 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.032e-7■■■■■ 27.6
DDX59Q5T1V6 EPS8L2-208ENST00000526909 3844 ntTSL 512.16□□□□□ -0.462e-7■■■■■ 27.6
DDX59Q5T1V6 NUBPL-204ENST00000548937 578 ntTSL 315.39■□□□□ 0.051e-7■■■■■ 27.6
DDX59Q5T1V6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.067e-7■■■■■ 27.6
DDX59Q5T1V6 HMG20B-213ENST00000488973 2434 ntTSL 1 (best)18.82■□□□□ 0.67e-7■■■■■ 27.6
DDX59Q5T1V6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.745e-10■■■■■ 27.6
DDX59Q5T1V6 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.32□□□□□ -0.121e-17■■■■■ 27.6
DDX59Q5T1V6 MGAT5-204ENST00000481801 651 ntTSL 322.51■■□□□ 1.194e-7■■■■■ 27.6
DDX59Q5T1V6 MGAT5-203ENST00000468758 816 ntTSL 522.51■■□□□ 1.194e-7■■■■■ 27.6
DDX59Q5T1V6 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.084e-7■■■■■ 27.6
DDX59Q5T1V6 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC13.28□□□□□ -0.282e-8■■■■■ 27.5
DDX59Q5T1V6 ABCD3-204ENST00000468860 661 ntTSL 316.31■□□□□ 0.21e-6■■■■■ 27.5
DDX59Q5T1V6 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC10.97□□□□□ -0.651e-6■■■■■ 27.5
DDX59Q5T1V6 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.261e-6■■■■■ 27.5
Retrieved 100 of 7,289 protein–RNA pairs in 95.7 ms