RNA–Protein interactions for RNA: ENST00000216463.8

TIMM9-201, Transcript of translocase of inner mitochondrial membrane 9, humanhuman

TSL 3

Gene TIMM9, Length 1,075 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9-201ENST00000216463 AEBP2Q6ZN18 517 aaPredicted RBP26.12■■□□□ 1.77
TIMM9-201ENST00000216463 CHIC1Q5VXU3 224 aa24.97■■□□□ 1.59
TIMM9-201ENST00000216463 SENP3Q9H4L4 574 aaPredicted RBP22.04■■□□□ 1.12
TIMM9-201ENST00000216463 PHF23Q9BUL5 403 aaPredicted RBP22.02■■□□□ 1.12
TIMM9-201ENST00000216463 FOXD1Q16676 465 aa20.65■□□□□ 0.9
TIMM9-201ENST00000216463 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.8
TIMM9-201ENST00000216463 PPP6R1Q9UPN7 881 aa19.61■□□□□ 0.73
TIMM9-201ENST00000216463 ADRA2BP18089 450 aa19.54■□□□□ 0.72
TIMM9-201ENST00000216463 PIAS4Q8N2W9 510 aaPredicted RBP19.31■□□□□ 0.68
TIMM9-201ENST00000216463 MSH5O43196 834 aa19.05■□□□□ 0.64
TIMM9-201ENST00000216463 POTEDQ86YR6 584 aa18.36■□□□□ 0.53
TIMM9-201ENST00000216463 MAPK8IP2Q13387 824 aaPredicted RBP17.9■□□□□ 0.46
TIMM9-201ENST00000216463 PPP4R3CPQ6ZMV5 832 aa17.67■□□□□ 0.42
TIMM9-201ENST00000216463 SCAF1Q9H7N4 1312 aaKnown RBP17.67■□□□□ 0.42
TIMM9-201ENST00000216463 DMRT2Q9Y5R5 561 aa17.57■□□□□ 0.4
TIMM9-201ENST00000216463 CNKSR2Q8WXI2 1034 aa17.2■□□□□ 0.34
TIMM9-201ENST00000216463 HOXD11P31277 338 aaPredicted RBP17.04■□□□□ 0.32
TIMM9-201ENST00000216463 RNF216Q9NWF9 866 aaPredicted RBP16.97■□□□□ 0.31
TIMM9-201ENST00000216463 NCBP3Q53F19 620 aaKnown RBP16.96■□□□□ 0.31
TIMM9-201ENST00000216463 DCAF8L1A6NGE4 600 aa16.89■□□□□ 0.29
TIMM9-201ENST00000216463 NPM3O75607 178 aaKnown RBP16.85■□□□□ 0.29
TIMM9-201ENST00000216463 KCNA4P22459 653 aa16.83■□□□□ 0.28
TIMM9-201ENST00000216463 RNF39Q9H2S5 420 aa16.36■□□□□ 0.21
TIMM9-201ENST00000216463 DNAJC5BQ9UF47 199 aa16.27■□□□□ 0.2
TIMM9-201ENST00000216463 CACNB1Q02641 598 aaPredicted RBP16.25■□□□□ 0.19
TIMM9-201ENST00000216463 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.24■□□□□ 0.193e-7■□□□□ 9.7
TIMM9-201ENST00000216463 C1QBPQ07021 282 aaKnown RBP16.07■□□□□ 0.16
TIMM9-201ENST00000216463 SLC4A2P04920 1241 aa16.06■□□□□ 0.16
TIMM9-201ENST00000216463 U3KPZ7 1027 aaPredicted RBP15.99■□□□□ 0.15
TIMM9-201ENST00000216463 SLC4A1APQ9BWU0 796 aaKnown RBP15.88■□□□□ 0.13
TIMM9-201ENST00000216463 SPINK5Q9NQ38 1064 aaPredicted RBP15.72■□□□□ 0.11
TIMM9-201ENST00000216463 CAPN15O75808 1086 aa15.6■□□□□ 0.09
TIMM9-201ENST00000216463 ZBTB22O15209 634 aa15.52■□□□□ 0.08
TIMM9-201ENST00000216463 FOXD4L1Q9NU39 408 aa15.51■□□□□ 0.07
TIMM9-201ENST00000216463 MYCNP04198 464 aaPredicted RBP15.48■□□□□ 0.07
TIMM9-201ENST00000216463 TRHP20396 242 aaPredicted RBP15.45■□□□□ 0.06
TIMM9-201ENST00000216463 DSG3P32926 999 aa15.45■□□□□ 0.06
TIMM9-201ENST00000216463 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.44■□□□□ 0.06
TIMM9-201ENST00000216463 HNRNPUL2Q1KMD3 747 aaKnown RBP15.44■□□□□ 0.06
TIMM9-201ENST00000216463 SAMD1Q6SPF0 538 aaPredicted RBP15.42■□□□□ 0.06
TIMM9-201ENST00000216463 APLP2Q06481 763 aa15.34■□□□□ 0.05
TIMM9-201ENST00000216463 ABCB7O75027 752 aa15.33■□□□□ 0.04
TIMM9-201ENST00000216463 ZNF219Q9P2Y4 722 aaPredicted RBP15.3■□□□□ 0.04
TIMM9-201ENST00000216463 ATF5Q9Y2D1 282 aaPredicted RBP15.29■□□□□ 0.04
TIMM9-201ENST00000216463 POLA2Q14181 598 aa15.09■□□□□ 0.01
TIMM9-201ENST00000216463 CSRNP3Q8WYN3 585 aa15.05■□□□□ -0
TIMM9-201ENST00000216463 EHMT2Q96KQ7 1210 aa15.01□□□□□ -0.01
TIMM9-201ENST00000216463 ATXN8OSP0DMR3 200 aa14.93□□□□□ -0.02
TIMM9-201ENST00000216463 ZBTB12Q9Y330 459 aaPredicted RBP14.63□□□□□ -0.07
TIMM9-201ENST00000216463 OSCARQ8IYS5 282 aa14.61□□□□□ -0.07
TIMM9-201ENST00000216463 RBM42Q9BTD8 480 aaKnown RBP14.59□□□□□ -0.07
TIMM9-201ENST00000216463 MKRN4PQ13434 485 aaPredicted RBP14.56□□□□□ -0.08
TIMM9-201ENST00000216463 FBLN2P98095 1184 aa14.47□□□□□ -0.09
TIMM9-201ENST00000216463 AKT1S1Q96B36 256 aa14.38□□□□□ -0.11
TIMM9-201ENST00000216463 REM2Q8IYK8 340 aaPredicted RBP14.32□□□□□ -0.12
TIMM9-201ENST00000216463 POTEHQ6S545 545 aa14.31□□□□□ -0.12
TIMM9-201ENST00000216463 SPDYE2BA6NHP3 402 aa14.28□□□□□ -0.12
TIMM9-201ENST00000216463 SPDYE6P0CI01 402 aa14.28□□□□□ -0.12
TIMM9-201ENST00000216463 SPDYE2Q495Y8 402 aa14.28□□□□□ -0.12
TIMM9-201ENST00000216463 CHRDL2Q6WN34 429 aa14.26□□□□□ -0.13
TIMM9-201ENST00000216463 ZNF692Q9BU19 519 aaPredicted RBP14.22□□□□□ -0.13
TIMM9-201ENST00000216463 PITPNM1O00562 1244 aa14.17□□□□□ -0.14
TIMM9-201ENST00000216463 SSUH2Q9Y2M2 353 aa14.17□□□□□ -0.14
TIMM9-201ENST00000216463 PABPN1Q86U42 306 aaKnown RBP eCLIP14.04□□□□□ -0.16
TIMM9-201ENST00000216463 PIP4P2Q8N4L2 257 aa14.02□□□□□ -0.17
TIMM9-201ENST00000216463 CLEC11AQ9Y240 323 aa14.02□□□□□ -0.17
TIMM9-201ENST00000216463 FXR2P51116 673 aaKnown RBP eCLIP13.96□□□□□ -0.17
TIMM9-201ENST00000216463 SPDYE1Q8NFV5 336 aaPredicted RBP13.96□□□□□ -0.17
TIMM9-201ENST00000216463 SPDYE4A6NLX3 237 aa13.94□□□□□ -0.18
TIMM9-201ENST00000216463 PRKAR2AP13861 404 aaKnown RBP13.8□□□□□ -0.2
TIMM9-201ENST00000216463 CHADLQ6NUI6 762 aa13.79□□□□□ -0.2
TIMM9-201ENST00000216463 PRR29P0C7W0 189 aa13.78□□□□□ -0.2
TIMM9-201ENST00000216463 HAX1O00165 279 aa13.68□□□□□ -0.22
TIMM9-201ENST00000216463 EVX2Q03828 476 aa13.66□□□□□ -0.22
TIMM9-201ENST00000216463 PROM2Q8N271 834 aa13.64□□□□□ -0.23
TIMM9-201ENST00000216463 FKBP8Q14318 412 aa13.6□□□□□ -0.23
TIMM9-201ENST00000216463 STAG3Q9UJ98 1225 aa13.59□□□□□ -0.23
TIMM9-201ENST00000216463 CREBZFQ9NS37 354 aa13.57□□□□□ -0.24
TIMM9-201ENST00000216463 SP7Q8TDD2 431 aaPredicted RBP13.54□□□□□ -0.24
TIMM9-201ENST00000216463 FARP1Q9Y4F1 1045 aaPredicted RBP13.52□□□□□ -0.25
TIMM9-201ENST00000216463 C19orf67A6NJJ6 358 aa13.5□□□□□ -0.25
TIMM9-201ENST00000216463 MNX1P50219 401 aaPredicted RBP13.38□□□□□ -0.27
TIMM9-201ENST00000216463 CD44P16070 742 aaKnown RBP13.36□□□□□ -0.27
TIMM9-201ENST00000216463 MIER1Q8N108 512 aa13.28□□□□□ -0.28
TIMM9-201ENST00000216463 GABBR2O75899 941 aa13.27□□□□□ -0.29
TIMM9-201ENST00000216463 ZRANB1Q9UGI0 708 aa13.24□□□□□ -0.29
TIMM9-201ENST00000216463 NPM1P06748 294 aaKnown RBP eCLIP13.2□□□□□ -0.3
TIMM9-201ENST00000216463 PLCD3Q8N3E9 789 aa13.18□□□□□ -0.3
TIMM9-201ENST00000216463 ZNF579Q8NAF0 562 aaKnown RBP13.13□□□□□ -0.31
TIMM9-201ENST00000216463 PHF12Q96QT6 1004 aa13.13□□□□□ -0.31
TIMM9-201ENST00000216463 TSPYL2Q9H2G4 693 aaPredicted RBP13.11□□□□□ -0.31
TIMM9-201ENST00000216463 PLEKHG5O94827 1062 aa13.09□□□□□ -0.31
TIMM9-201ENST00000216463 FBXO3Q9UK99 471 aa13.08□□□□□ -0.32
TIMM9-201ENST00000216463 PAK3O75914 559 aaPredicted RBP13.07□□□□□ -0.32
TIMM9-201ENST00000216463 RASEFQ8IZ41 740 aa13.07□□□□□ -0.32
TIMM9-201ENST00000216463 GALR2O43603 387 aaPredicted RBP13.05□□□□□ -0.32
TIMM9-201ENST00000216463 POTEIP0CG38 1075 aa13.05□□□□□ -0.32
TIMM9-201ENST00000216463 VASPP50552 380 aaPredicted RBP13.01□□□□□ -0.33
TIMM9-201ENST00000216463 NUBP1P53384 320 aa13□□□□□ -0.33
TIMM9-201ENST00000216463 CCDC61Q9Y6R9 512 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms