RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 AEBP2Q6ZN18 517 aaPredicted RBP10.86□□□□□ -0.67
SCAMP1-201ENST00000320280 CHIC1Q5VXU3 224 aa10.26□□□□□ -0.77
SCAMP1-201ENST00000320280 SENP3Q9H4L4 574 aaPredicted RBP9.19□□□□□ -0.94
SCAMP1-201ENST00000320280 PHF23Q9BUL5 403 aaPredicted RBP9.18□□□□□ -0.94
SCAMP1-201ENST00000320280 FOXD1Q16676 465 aa8.64□□□□□ -1.03
SCAMP1-201ENST00000320280 PLPPR3Q6T4P5 718 aa8.26□□□□□ -1.09
SCAMP1-201ENST00000320280 ADRA2BP18089 450 aa8.22□□□□□ -1.09
SCAMP1-201ENST00000320280 PIAS4Q8N2W9 510 aaPredicted RBP8.19□□□□□ -1.1
SCAMP1-201ENST00000320280 PPP6R1Q9UPN7 881 aa8.18□□□□□ -1.1
SCAMP1-201ENST00000320280 MSH5O43196 834 aa7.95□□□□□ -1.14
SCAMP1-201ENST00000320280 NISCHQ9Y2I1 1504 aa7.92□□□□□ -1.14
SCAMP1-201ENST00000320280 POTEDQ86YR6 584 aa7.8□□□□□ -1.16
SCAMP1-201ENST00000320280 MAPK8IP2Q13387 824 aaPredicted RBP7.56□□□□□ -1.2
SCAMP1-201ENST00000320280 DCAF8L1A6NGE4 600 aa7.39□□□□□ -1.23
SCAMP1-201ENST00000320280 SCAF1Q9H7N4 1312 aaKnown RBP7.35□□□□□ -1.23
SCAMP1-201ENST00000320280 PPP4R3CPQ6ZMV5 832 aa7.31□□□□□ -1.24
SCAMP1-201ENST00000320280 DMRT2Q9Y5R5 561 aa7.24□□□□□ -1.25
SCAMP1-201ENST00000320280 CCDC180Q9P1Z9 1646 aa7.19□□□□□ -1.26
SCAMP1-201ENST00000320280 CNKSR2Q8WXI2 1034 aa7.07□□□□□ -1.28
SCAMP1-201ENST00000320280 CACNB1Q02641 598 aaPredicted RBP7.02□□□□□ -1.29
SCAMP1-201ENST00000320280 NCBP3Q53F19 620 aaKnown RBP6.98□□□□□ -1.29
SCAMP1-201ENST00000320280 KCNA4P22459 653 aa6.94□□□□□ -1.3
SCAMP1-201ENST00000320280 HOXD11P31277 338 aaPredicted RBP6.94□□□□□ -1.3
SCAMP1-201ENST00000320280 RNF216Q9NWF9 866 aaPredicted RBP6.94□□□□□ -1.3
SCAMP1-201ENST00000320280 NPM3O75607 178 aaKnown RBP6.93□□□□□ -1.3
SCAMP1-201ENST00000320280 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.9□□□□□ -1.3
SCAMP1-201ENST00000320280 RNF39Q9H2S5 420 aa6.8□□□□□ -1.32
SCAMP1-201ENST00000320280 MYO15BQ96JP2 1530 aa6.75□□□□□ -1.33
SCAMP1-201ENST00000320280 DCAF1Q9Y4B6 1507 aa6.73□□□□□ -1.33
SCAMP1-201ENST00000320280 CAPN15O75808 1086 aa6.69□□□□□ -1.34
SCAMP1-201ENST00000320280 C1QBPQ07021 282 aaKnown RBP6.68□□□□□ -1.34
SCAMP1-201ENST00000320280 ZCCHC6Q5VYS8 1495 aaKnown RBP6.66□□□□□ -1.34
SCAMP1-201ENST00000320280 SPINK5Q9NQ38 1064 aaPredicted RBP6.65□□□□□ -1.34
SCAMP1-201ENST00000320280 TRHP20396 242 aaPredicted RBP6.65□□□□□ -1.34
SCAMP1-201ENST00000320280 NACADO15069 1562 aa6.65□□□□□ -1.34
SCAMP1-201ENST00000320280 U3KPZ7 1027 aaPredicted RBP6.64□□□□□ -1.35
SCAMP1-201ENST00000320280 ABCB7O75027 752 aa6.6□□□□□ -1.35
SCAMP1-201ENST00000320280 RB1CC1Q8TDY2 1594 aa6.59□□□□□ -1.35
SCAMP1-201ENST00000320280 SLC4A2P04920 1241 aa6.58□□□□□ -1.36
SCAMP1-201ENST00000320280 SLC4A1APQ9BWU0 796 aaKnown RBP6.55□□□□□ -1.36
SCAMP1-201ENST00000320280 ABCC9O60706 1549 aa6.54□□□□□ -1.36
SCAMP1-201ENST00000320280 SHROOM4Q9ULL8 1493 aa6.52□□□□□ -1.37
SCAMP1-201ENST00000320280 DSG3P32926 999 aa6.44□□□□□ -1.38
SCAMP1-201ENST00000320280 DNAJC5BQ9UF47 199 aa6.43□□□□□ -1.38
SCAMP1-201ENST00000320280 UNC13AQ9UPW8 1703 aa6.43□□□□□ -1.38
SCAMP1-201ENST00000320280 ZNF219Q9P2Y4 722 aaPredicted RBP6.38□□□□□ -1.39
SCAMP1-201ENST00000320280 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.38□□□□□ -1.39
SCAMP1-201ENST00000320280 HNRNPUL2Q1KMD3 747 aaKnown RBP6.38□□□□□ -1.39
SCAMP1-201ENST00000320280 POLA2Q14181 598 aa6.38□□□□□ -1.39
SCAMP1-201ENST00000320280 SAMD1Q6SPF0 538 aaPredicted RBP6.37□□□□□ -1.39
SCAMP1-201ENST00000320280 MYCNP04198 464 aaPredicted RBP6.36□□□□□ -1.39
SCAMP1-201ENST00000320280 FOXD4L1Q9NU39 408 aa6.35□□□□□ -1.39
SCAMP1-201ENST00000320280 APLP2Q06481 763 aa6.34□□□□□ -1.39
SCAMP1-201ENST00000320280 ZBTB22O15209 634 aa6.33□□□□□ -1.4
SCAMP1-201ENST00000320280 ATF5Q9Y2D1 282 aaPredicted RBP6.33□□□□□ -1.4
SCAMP1-201ENST00000320280 EHMT2Q96KQ7 1210 aa6.32□□□□□ -1.4
SCAMP1-201ENST00000320280 BICRAQ9NZM4 1560 aa6.31□□□□□ -1.4
SCAMP1-201ENST00000320280 SCRIBQ14160 1630 aa6.29□□□□□ -1.4
SCAMP1-201ENST00000320280 OSCARQ8IYS5 282 aa6.19□□□□□ -1.42
SCAMP1-201ENST00000320280 PEG3Q9GZU2 1588 aa6.18□□□□□ -1.42
SCAMP1-201ENST00000320280 BAZ1AQ9NRL2 1556 aaPredicted RBP6.18□□□□□ -1.42
SCAMP1-201ENST00000320280 DCAF8L2P0C7V8 631 aa6.17□□□□□ -1.42
SCAMP1-201ENST00000320280 SMARCA2P51531 1590 aa6.15□□□□□ -1.42
SCAMP1-201ENST00000320280 POTEHQ6S545 545 aa6.15□□□□□ -1.42
SCAMP1-201ENST00000320280 SMARCA4P51532 1647 aa6.15□□□□□ -1.43
SCAMP1-201ENST00000320280 EIF4G1Q04637 1599 aaKnown RBP6.14□□□□□ -1.43
SCAMP1-201ENST00000320280 RBM42Q9BTD8 480 aaKnown RBP6.13□□□□□ -1.43
SCAMP1-201ENST00000320280 HMGXB3Q12766 1538 aa6.12□□□□□ -1.43
SCAMP1-201ENST00000320280 CSRNP3Q8WYN3 585 aa6.09□□□□□ -1.43
SCAMP1-201ENST00000320280 CLEC11AQ9Y240 323 aa6.08□□□□□ -1.44
SCAMP1-201ENST00000320280 CHRDL2Q6WN34 429 aa6.07□□□□□ -1.44
SCAMP1-201ENST00000320280 NCAPD3P42695 1498 aa6.06□□□□□ -1.44
SCAMP1-201ENST00000320280 CC2D2AQ9P2K1 1620 aa6.06□□□□□ -1.44
SCAMP1-201ENST00000320280 FBLN2P98095 1184 aa6.04□□□□□ -1.44
SCAMP1-201ENST00000320280 TOP2AP11388 1531 aaKnown RBP6.03□□□□□ -1.44
SCAMP1-201ENST00000320280 ZBTB12Q9Y330 459 aaPredicted RBP6.03□□□□□ -1.44
SCAMP1-201ENST00000320280 PRDM2Q13029 1718 aa6.02□□□□□ -1.45
SCAMP1-201ENST00000320280 ATAD2BQ9ULI0 1458 aa6.02□□□□□ -1.45
SCAMP1-201ENST00000320280 MROH2BQ7Z745 1585 aa6.02□□□□□ -1.45
SCAMP1-201ENST00000320280 PABPN1Q86U42 306 aaKnown RBP eCLIP6□□□□□ -1.45
SCAMP1-201ENST00000320280 CECR2Q9BXF3 1484 aa6□□□□□ -1.45
SCAMP1-201ENST00000320280 RSF1Q96T23 1441 aaPredicted RBP6□□□□□ -1.45
SCAMP1-201ENST00000320280 ZNF692Q9BU19 519 aaPredicted RBP6□□□□□ -1.45
SCAMP1-201ENST00000320280 REM2Q8IYK8 340 aaPredicted RBP5.99□□□□□ -1.45
SCAMP1-201ENST00000320280 BAZ1BQ9UIG0 1483 aaKnown RBP5.98□□□□□ -1.45
SCAMP1-201ENST00000320280 WIZO95785 1651 aa5.97□□□□□ -1.45
SCAMP1-201ENST00000320280 MKRN4PQ13434 485 aaPredicted RBP5.97□□□□□ -1.45
SCAMP1-201ENST00000320280 PITPNM1O00562 1244 aa5.95□□□□□ -1.46
SCAMP1-201ENST00000320280 ATXN8OSP0DMR3 200 aa5.95□□□□□ -1.46
SCAMP1-201ENST00000320280 AKT1S1Q96B36 256 aa5.95□□□□□ -1.46
SCAMP1-201ENST00000320280 HAX1O00165 279 aa5.95□□□□□ -1.46
SCAMP1-201ENST00000320280 LAMC3Q9Y6N6 1575 aa5.94□□□□□ -1.46
SCAMP1-201ENST00000320280 CHADLQ6NUI6 762 aa5.92□□□□□ -1.46
SCAMP1-201ENST00000320280 SPDYE2BA6NHP3 402 aa5.9□□□□□ -1.47
SCAMP1-201ENST00000320280 SPDYE6P0CI01 402 aa5.9□□□□□ -1.47
SCAMP1-201ENST00000320280 SPDYE2Q495Y8 402 aa5.9□□□□□ -1.47
SCAMP1-201ENST00000320280 PIP4P2Q8N4L2 257 aa5.89□□□□□ -1.47
SCAMP1-201ENST00000320280 PRKAR2AP13861 404 aaKnown RBP5.87□□□□□ -1.47
SCAMP1-201ENST00000320280 CFTRP13569 1480 aa5.86□□□□□ -1.47
SCAMP1-201ENST00000320280 WDR97A6NE52 1622 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms