RNA–Protein interactions for RNA: ENST00000287647.7

FANCD2-201, Transcript of FA complementation group D2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FANCD2, Length 5,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCD2-201ENST00000287647 NISCHQ9Y2I1 1504 aa13.08□□□□□ -0.32
FANCD2-201ENST00000287647 DCAF8L2P0C7V8 631 aa12.19□□□□□ -0.46
FANCD2-201ENST00000287647 SUPT5HO00267 1087 aaKnown RBP11.47□□□□□ -0.57
FANCD2-201ENST00000287647 FAM9AQ8IZU1 332 aaPredicted RBP11.42□□□□□ -0.58
FANCD2-201ENST00000287647 CCDC180Q9P1Z9 1646 aa11.32□□□□□ -0.6
FANCD2-201ENST00000287647 SHROOM4Q9ULL8 1493 aa11.29□□□□□ -0.6
FANCD2-201ENST00000287647 APLP2Q06481 763 aa11.11□□□□□ -0.63
FANCD2-201ENST00000287647 EHMT2Q96KQ7 1210 aa11.02□□□□□ -0.65
FANCD2-201ENST00000287647 ABCC9O60706 1549 aa10.89□□□□□ -0.67
FANCD2-201ENST00000287647 ZCCHC6Q5VYS8 1495 aaKnown RBP10.88□□□□□ -0.67
FANCD2-201ENST00000287647 TRIM41Q8WV44 630 aa10.88□□□□□ -0.67
FANCD2-201ENST00000287647 NACADO15069 1562 aa10.84□□□□□ -0.67
FANCD2-201ENST00000287647 RB1CC1Q8TDY2 1594 aa10.84□□□□□ -0.67
FANCD2-201ENST00000287647 DCAF1Q9Y4B6 1507 aa10.83□□□□□ -0.68
FANCD2-201ENST00000287647 PELP1Q8IZL8 1130 aaKnown RBP10.8□□□□□ -0.68
FANCD2-201ENST00000287647 ZEB1P37275 1124 aaPredicted RBP10.79□□□□□ -0.68
FANCD2-201ENST00000287647 MYO15BQ96JP2 1530 aa10.7□□□□□ -0.7
FANCD2-201ENST00000287647 TTBK1Q5TCY1 1321 aaPredicted RBP10.64□□□□□ -0.71
FANCD2-201ENST00000287647 UBTFP17480 764 aaKnown RBP10.63□□□□□ -0.71
FANCD2-201ENST00000287647 MYT1Q01538 1121 aa10.63□□□□□ -0.71
FANCD2-201ENST00000287647 RANGAP1P46060 587 aaPredicted RBP10.62□□□□□ -0.71
FANCD2-201ENST00000287647 ATP1B4Q9UN42 357 aaPredicted RBP10.59□□□□□ -0.71
FANCD2-201ENST00000287647 HRCP23327 699 aa10.59□□□□□ -0.71
FANCD2-201ENST00000287647 PCGF6Q9BYE7 350 aa10.57□□□□□ -0.72
FANCD2-201ENST00000287647 SCRIBQ14160 1630 aa10.54□□□□□ -0.72
FANCD2-201ENST00000287647 CCER1Q8TC90 406 aaPredicted RBP10.48□□□□□ -0.73
FANCD2-201ENST00000287647 PABPN1Q86U42 306 aaKnown RBP eCLIP10.44□□□□□ -0.74
FANCD2-201ENST00000287647 TRIM26Q12899 539 aaPredicted RBP10.43□□□□□ -0.74
FANCD2-201ENST00000287647 CHIC1Q5VXU3 224 aa10.42□□□□□ -0.74
FANCD2-201ENST00000287647 CENPBP07199 599 aaPredicted RBP10.41□□□□□ -0.74
FANCD2-201ENST00000287647 ACIN1Q9UKV3 1341 aaKnown RBP10.41□□□□□ -0.74
FANCD2-201ENST00000287647 BAZ1AQ9NRL2 1556 aaPredicted RBP10.4□□□□□ -0.75
FANCD2-201ENST00000287647 EEA1Q15075 1411 aa10.39□□□□□ -0.75
FANCD2-201ENST00000287647 CDK11AQ9UQ88 783 aaPredicted RBP10.28□□□□□ -0.76
FANCD2-201ENST00000287647 SMARCA2P51531 1590 aa10.28□□□□□ -0.76
FANCD2-201ENST00000287647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.28□□□□□ -0.76
FANCD2-201ENST00000287647 HNRNPUL2Q1KMD3 747 aaKnown RBP10.28□□□□□ -0.76
FANCD2-201ENST00000287647 ERICH6Q7L0X2 663 aa10.28□□□□□ -0.76
FANCD2-201ENST00000287647 BAZ1BQ9UIG0 1483 aaKnown RBP10.27□□□□□ -0.77
FANCD2-201ENST00000287647 MYT1LQ9UL68 1186 aa10.26□□□□□ -0.77
FANCD2-201ENST00000287647 NEFLP07196 543 aa10.25□□□□□ -0.77
FANCD2-201ENST00000287647 CSRNP3Q8WYN3 585 aa10.24□□□□□ -0.77
FANCD2-201ENST00000287647 PPARGC1BQ86YN6 1023 aaKnown RBP10.22□□□□□ -0.77
FANCD2-201ENST00000287647 RSF1Q96T23 1441 aaPredicted RBP10.19□□□□□ -0.78
FANCD2-201ENST00000287647 ITGAEP38570 1179 aa10.17□□□□□ -0.78
FANCD2-201ENST00000287647 YTHDC1Q96MU7 727 aaKnown RBP10.12□□□□□ -0.79
FANCD2-201ENST00000287647 LOC105371045A0A1W2PR82 267 aa10.09□□□□□ -0.79
FANCD2-201ENST00000287647 KIF27Q86VH2 1401 aa10.08□□□□□ -0.8
FANCD2-201ENST00000287647 NPM1P06748 294 aaKnown RBP eCLIP10.08□□□□□ -0.8
FANCD2-201ENST00000287647 PDS5BQ9NTI5 1447 aa10.07□□□□□ -0.8
FANCD2-201ENST00000287647 POLR3GLQ9BT43 218 aa10.07□□□□□ -0.8
FANCD2-201ENST00000287647 ABCC8Q09428 1581 aa10.07□□□□□ -0.8
FANCD2-201ENST00000287647 WRNQ14191 1432 aaPredicted RBP eCLIP10.07□□□□□ -0.8
FANCD2-201ENST00000287647 GOLGA3Q08378 1498 aa10.05□□□□□ -0.8
FANCD2-201ENST00000287647 TOP2AP11388 1531 aaKnown RBP10.04□□□□□ -0.8
FANCD2-201ENST00000287647 CEP164Q9UPV0 1460 aa10.03□□□□□ -0.8
FANCD2-201ENST00000287647 CLSPNQ9HAW4 1339 aa10.02□□□□□ -0.81
FANCD2-201ENST00000287647 FBLN2P98095 1184 aa9.98□□□□□ -0.81
FANCD2-201ENST00000287647 ERCC6Q03468 1493 aa9.98□□□□□ -0.81
FANCD2-201ENST00000287647 FAM50AQ14320 339 aaKnown RBP9.97□□□□□ -0.81
FANCD2-201ENST00000287647 CHMP7Q8WUX9 453 aaPredicted RBP9.95□□□□□ -0.82
FANCD2-201ENST00000287647 FHAD1B1AJZ9 1412 aa9.95□□□□□ -0.82
FANCD2-201ENST00000287647 TNIKQ9UKE5 1360 aa9.94□□□□□ -0.82
FANCD2-201ENST00000287647 SMARCA4P51532 1647 aa9.94□□□□□ -0.82
FANCD2-201ENST00000287647 SLC4A1APQ9BWU0 796 aaKnown RBP9.94□□□□□ -0.82
FANCD2-201ENST00000287647 DAXXQ9UER7 740 aaPredicted RBP9.94□□□□□ -0.82
FANCD2-201ENST00000287647 TRIM52Q96A61 297 aa9.93□□□□□ -0.82
FANCD2-201ENST00000287647 CLIP1P30622 1438 aa9.91□□□□□ -0.82
FANCD2-201ENST00000287647 CNGB1Q14028 1251 aaPredicted RBP9.9□□□□□ -0.83
FANCD2-201ENST00000287647 ATAD2BQ9ULI0 1458 aa9.89□□□□□ -0.83
FANCD2-201ENST00000287647 CADPSQ9ULU8 1353 aa9.89□□□□□ -0.83
FANCD2-201ENST00000287647 ESF1Q9H501 851 aaKnown RBP9.88□□□□□ -0.83
FANCD2-201ENST00000287647 MROH2BQ7Z745 1585 aa9.88□□□□□ -0.83
FANCD2-201ENST00000287647 MTUS2Q5JR59 1369 aa9.87□□□□□ -0.83
FANCD2-201ENST00000287647 CECR2Q9BXF3 1484 aa9.87□□□□□ -0.83
FANCD2-201ENST00000287647 NCAPD3P42695 1498 aa9.87□□□□□ -0.83
FANCD2-201ENST00000287647 CARMIL2Q6F5E8 1435 aa9.86□□□□□ -0.83
FANCD2-201ENST00000287647 DIEXFQ68CQ4 756 aaKnown RBP9.85□□□□□ -0.83
FANCD2-201ENST00000287647 CCDC88BA6NC98 1476 aa9.85□□□□□ -0.83
FANCD2-201ENST00000287647 TSPY4P0CV99 314 aa9.85□□□□□ -0.83
FANCD2-201ENST00000287647 TSPY10P0CW01 314 aa9.85□□□□□ -0.83
FANCD2-201ENST00000287647 SLC24A1O60721 1099 aa9.84□□□□□ -0.83
FANCD2-201ENST00000287647 PLEKHD1A6NEE1 506 aa9.83□□□□□ -0.84
FANCD2-201ENST00000287647 HMGXB3Q12766 1538 aa9.82□□□□□ -0.84
FANCD2-201ENST00000287647 NEUROD1Q13562 356 aa9.81□□□□□ -0.84
FANCD2-201ENST00000287647 CARMIL1Q5VZK9 1371 aa9.8□□□□□ -0.84
FANCD2-201ENST00000287647 FMN1Q68DA7 1419 aa9.78□□□□□ -0.84
FANCD2-201ENST00000287647 CEP162Q5TB80 1403 aa9.78□□□□□ -0.84
FANCD2-201ENST00000287647 NEFMP07197 916 aa9.78□□□□□ -0.84
FANCD2-201ENST00000287647 CUX2O14529 1486 aa9.78□□□□□ -0.84
FANCD2-201ENST00000287647 ZNF316A6NFI3 1004 aaPredicted RBP9.78□□□□□ -0.84
FANCD2-201ENST00000287647 ZNF326Q5BKZ1 582 aaKnown RBP9.76□□□□□ -0.85
FANCD2-201ENST00000287647 SOGA1O94964 1423 aa9.76□□□□□ -0.85
FANCD2-201ENST00000287647 P3H3Q8IVL6 736 aa9.75□□□□□ -0.85
FANCD2-201ENST00000287647 TONSLQ96HA7 1378 aa9.75□□□□□ -0.85
FANCD2-201ENST00000287647 ANP32CO43423 234 aa9.74□□□□□ -0.85
FANCD2-201ENST00000287647 TIMELESSQ9UNS1 1208 aa9.74□□□□□ -0.85
FANCD2-201ENST00000287647 EIF4G1Q04637 1599 aaKnown RBP9.72□□□□□ -0.85
FANCD2-201ENST00000287647 RSPH4AQ5TD94 716 aa9.72□□□□□ -0.85
FANCD2-201ENST00000287647 WIZO95785 1651 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms