RNA–Protein interactions for RNA: ENST00000556007.6

TIMM9-208, Transcript of translocase of inner mitochondrial membrane 9, humanhuman

TSL 3 BASIC

Gene TIMM9, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9-208ENST00000556007 AEBP2Q6ZN18 517 aaPredicted RBP24.59■■□□□ 1.53
TIMM9-208ENST00000556007 CHIC1Q5VXU3 224 aa23.74■■□□□ 1.39
TIMM9-208ENST00000556007 SENP3Q9H4L4 574 aaPredicted RBP20.94■□□□□ 0.94
TIMM9-208ENST00000556007 PHF23Q9BUL5 403 aaPredicted RBP20.83■□□□□ 0.93
TIMM9-208ENST00000556007 FOXD1Q16676 465 aa19.44■□□□□ 0.7
TIMM9-208ENST00000556007 PLPPR3Q6T4P5 718 aa19.13■□□□□ 0.65
TIMM9-208ENST00000556007 PPP6R1Q9UPN7 881 aa18.46■□□□□ 0.55
TIMM9-208ENST00000556007 ADRA2BP18089 450 aa18.39■□□□□ 0.53
TIMM9-208ENST00000556007 PIAS4Q8N2W9 510 aaPredicted RBP18.22■□□□□ 0.51
TIMM9-208ENST00000556007 MSH5O43196 834 aa18.08■□□□□ 0.48
TIMM9-208ENST00000556007 POTEDQ86YR6 584 aa16.98■□□□□ 0.31
TIMM9-208ENST00000556007 SCAF1Q9H7N4 1312 aaKnown RBP16.88■□□□□ 0.29
TIMM9-208ENST00000556007 PPP4R3CPQ6ZMV5 832 aa16.79■□□□□ 0.28
TIMM9-208ENST00000556007 MAPK8IP2Q13387 824 aaPredicted RBP16.77■□□□□ 0.28
TIMM9-208ENST00000556007 DMRT2Q9Y5R5 561 aa16.67■□□□□ 0.26
TIMM9-208ENST00000556007 CNKSR2Q8WXI2 1034 aa16.42■□□□□ 0.22
TIMM9-208ENST00000556007 NCBP3Q53F19 620 aaKnown RBP16.27■□□□□ 0.2
TIMM9-208ENST00000556007 HOXD11P31277 338 aaPredicted RBP16.23■□□□□ 0.19
TIMM9-208ENST00000556007 RNF216Q9NWF9 866 aaPredicted RBP16.19■□□□□ 0.18
TIMM9-208ENST00000556007 NPM3O75607 178 aaKnown RBP16.03■□□□□ 0.16
TIMM9-208ENST00000556007 KCNA4P22459 653 aa16.03■□□□□ 0.16
TIMM9-208ENST00000556007 DCAF8L1A6NGE4 600 aa15.82■□□□□ 0.12
TIMM9-208ENST00000556007 DNAJC5BQ9UF47 199 aa15.77■□□□□ 0.12
TIMM9-208ENST00000556007 RNF39Q9H2S5 420 aa15.47■□□□□ 0.07
TIMM9-208ENST00000556007 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.36■□□□□ 0.053e-7■□□□□ 9.7
TIMM9-208ENST00000556007 C1QBPQ07021 282 aaKnown RBP15.27■□□□□ 0.04
TIMM9-208ENST00000556007 SLC4A2P04920 1241 aa15.23■□□□□ 0.03
TIMM9-208ENST00000556007 CACNB1Q02641 598 aaPredicted RBP15.22■□□□□ 0.03
TIMM9-208ENST00000556007 SLC4A1APQ9BWU0 796 aaKnown RBP15.19■□□□□ 0.02
TIMM9-208ENST00000556007 U3KPZ7 1027 aaPredicted RBP15.13■□□□□ 0.01
TIMM9-208ENST00000556007 FOXD4L1Q9NU39 408 aa14.87□□□□□ -0.03
TIMM9-208ENST00000556007 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.86□□□□□ -0.03
TIMM9-208ENST00000556007 HNRNPUL2Q1KMD3 747 aaKnown RBP14.86□□□□□ -0.03
TIMM9-208ENST00000556007 MYCNP04198 464 aaPredicted RBP14.83□□□□□ -0.04
TIMM9-208ENST00000556007 SAMD1Q6SPF0 538 aaPredicted RBP14.78□□□□□ -0.04
TIMM9-208ENST00000556007 APLP2Q06481 763 aa14.77□□□□□ -0.05
TIMM9-208ENST00000556007 SPINK5Q9NQ38 1064 aaPredicted RBP14.77□□□□□ -0.05
TIMM9-208ENST00000556007 ZBTB22O15209 634 aa14.75□□□□□ -0.05
TIMM9-208ENST00000556007 CAPN15O75808 1086 aa14.69□□□□□ -0.06
TIMM9-208ENST00000556007 ZNF219Q9P2Y4 722 aaPredicted RBP14.61□□□□□ -0.07
TIMM9-208ENST00000556007 DSG3P32926 999 aa14.6□□□□□ -0.07
TIMM9-208ENST00000556007 TRHP20396 242 aaPredicted RBP14.54□□□□□ -0.08
TIMM9-208ENST00000556007 ATXN8OSP0DMR3 200 aa14.44□□□□□ -0.1
TIMM9-208ENST00000556007 CSRNP3Q8WYN3 585 aa14.42□□□□□ -0.1
TIMM9-208ENST00000556007 ATF5Q9Y2D1 282 aaPredicted RBP14.42□□□□□ -0.1
TIMM9-208ENST00000556007 ABCB7O75027 752 aa14.36□□□□□ -0.11
TIMM9-208ENST00000556007 EHMT2Q96KQ7 1210 aa14.33□□□□□ -0.12
TIMM9-208ENST00000556007 POLA2Q14181 598 aa14.27□□□□□ -0.13
TIMM9-208ENST00000556007 ZBTB12Q9Y330 459 aaPredicted RBP14.07□□□□□ -0.16
TIMM9-208ENST00000556007 RBM42Q9BTD8 480 aaKnown RBP13.93□□□□□ -0.18
TIMM9-208ENST00000556007 FBLN2P98095 1184 aa13.84□□□□□ -0.19
TIMM9-208ENST00000556007 MKRN4PQ13434 485 aaPredicted RBP13.8□□□□□ -0.2
TIMM9-208ENST00000556007 OSCARQ8IYS5 282 aa13.79□□□□□ -0.2
TIMM9-208ENST00000556007 AKT1S1Q96B36 256 aa13.69□□□□□ -0.22
TIMM9-208ENST00000556007 SPDYE2BA6NHP3 402 aa13.67□□□□□ -0.22
TIMM9-208ENST00000556007 SPDYE6P0CI01 402 aa13.67□□□□□ -0.22
TIMM9-208ENST00000556007 SPDYE2Q495Y8 402 aa13.67□□□□□ -0.22
TIMM9-208ENST00000556007 SSUH2Q9Y2M2 353 aa13.54□□□□□ -0.24
TIMM9-208ENST00000556007 REM2Q8IYK8 340 aaPredicted RBP13.53□□□□□ -0.24
TIMM9-208ENST00000556007 ZNF692Q9BU19 519 aaPredicted RBP13.51□□□□□ -0.25
TIMM9-208ENST00000556007 CHRDL2Q6WN34 429 aa13.44□□□□□ -0.26
TIMM9-208ENST00000556007 POTEHQ6S545 545 aa13.38□□□□□ -0.27
TIMM9-208ENST00000556007 PITPNM1O00562 1244 aa13.37□□□□□ -0.27
TIMM9-208ENST00000556007 PABPN1Q86U42 306 aaKnown RBP eCLIP13.32□□□□□ -0.28
TIMM9-208ENST00000556007 SPDYE4A6NLX3 237 aa13.31□□□□□ -0.28
TIMM9-208ENST00000556007 SPDYE1Q8NFV5 336 aaPredicted RBP13.31□□□□□ -0.28
TIMM9-208ENST00000556007 FXR2P51116 673 aaKnown RBP eCLIP13.23□□□□□ -0.29
TIMM9-208ENST00000556007 PIP4P2Q8N4L2 257 aa13.2□□□□□ -0.3
TIMM9-208ENST00000556007 CLEC11AQ9Y240 323 aa13.19□□□□□ -0.3
TIMM9-208ENST00000556007 PROM2Q8N271 834 aa13.15□□□□□ -0.3
TIMM9-208ENST00000556007 STAG3Q9UJ98 1225 aa13.09□□□□□ -0.31
TIMM9-208ENST00000556007 PRR29P0C7W0 189 aa13.07□□□□□ -0.32
TIMM9-208ENST00000556007 PRKAR2AP13861 404 aaKnown RBP13.01□□□□□ -0.33
TIMM9-208ENST00000556007 FKBP8Q14318 412 aa13□□□□□ -0.33
TIMM9-208ENST00000556007 CHADLQ6NUI6 762 aa12.92□□□□□ -0.34
TIMM9-208ENST00000556007 CREBZFQ9NS37 354 aa12.87□□□□□ -0.35
TIMM9-208ENST00000556007 HAX1O00165 279 aa12.82□□□□□ -0.36
TIMM9-208ENST00000556007 FARP1Q9Y4F1 1045 aaPredicted RBP12.81□□□□□ -0.36
TIMM9-208ENST00000556007 C19orf67A6NJJ6 358 aa12.78□□□□□ -0.36
TIMM9-208ENST00000556007 MNX1P50219 401 aaPredicted RBP12.73□□□□□ -0.37
TIMM9-208ENST00000556007 EVX2Q03828 476 aa12.72□□□□□ -0.37
TIMM9-208ENST00000556007 SP7Q8TDD2 431 aaPredicted RBP12.72□□□□□ -0.37
TIMM9-208ENST00000556007 FBXO3Q9UK99 471 aa12.68□□□□□ -0.38
TIMM9-208ENST00000556007 NPM1P06748 294 aaKnown RBP eCLIP12.64□□□□□ -0.39
TIMM9-208ENST00000556007 MIER1Q8N108 512 aa12.63□□□□□ -0.39
TIMM9-208ENST00000556007 CD44P16070 742 aaKnown RBP12.62□□□□□ -0.39
TIMM9-208ENST00000556007 PLEKHG5O94827 1062 aa12.61□□□□□ -0.39
TIMM9-208ENST00000556007 PLCD3Q8N3E9 789 aa12.57□□□□□ -0.4
TIMM9-208ENST00000556007 ZBTB47Q9UFB7 747 aaPredicted RBP12.52□□□□□ -0.41
TIMM9-208ENST00000556007 VASPP50552 380 aaPredicted RBP12.5□□□□□ -0.41
TIMM9-208ENST00000556007 CLCN6P51797 869 aa12.5□□□□□ -0.41
TIMM9-208ENST00000556007 ZNF579Q8NAF0 562 aaKnown RBP12.5□□□□□ -0.41
TIMM9-208ENST00000556007 ZRANB1Q9UGI0 708 aa12.49□□□□□ -0.41
TIMM9-208ENST00000556007 PAK3O75914 559 aaPredicted RBP12.48□□□□□ -0.41
TIMM9-208ENST00000556007 GABBR2O75899 941 aa12.47□□□□□ -0.41
TIMM9-208ENST00000556007 NUBP1P53384 320 aa12.41□□□□□ -0.42
TIMM9-208ENST00000556007 RASEFQ8IZ41 740 aa12.39□□□□□ -0.43
TIMM9-208ENST00000556007 CCDC61Q9Y6R9 512 aa12.37□□□□□ -0.43
TIMM9-208ENST00000556007 TSPYL2Q9H2G4 693 aaPredicted RBP12.36□□□□□ -0.43
TIMM9-208ENST00000556007 PHF12Q96QT6 1004 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms