Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 UQCC1-222ENST00000497717 471 ntTSL 57.72□□□□□ -1.171e-6■■■■□ 21.2
SRSF1Q07955 RPS6KB1-201ENST00000225577 5375 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.216e-6■■■■□ 21.2
SRSF1Q07955 UQCC1-211ENST00000438533 736 ntTSL 37.23□□□□□ -1.251e-6■■■■□ 21.2
SRSF1Q07955 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.282e-7■■■■□ 21.2
SRSF1Q07955 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.332e-7■■■■□ 21.2
SRSF1Q07955 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.31□□□□□ -1.46e-6■■■■□ 21.2
SRSF1Q07955 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.1□□□□□ -1.436e-6■■■■□ 21.2
SRSF1Q07955 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.41□□□□□ -1.541e-6■■■■□ 21.2
SRSF1Q07955 DTWD1-204ENST00000557988 1201 ntTSL 1 (best)4.41□□□□□ -1.76e-6■■■■□ 21.2
SRSF1Q07955 DTWD1-210ENST00000560735 599 ntTSL 34.05□□□□□ -1.766e-6■■■■□ 21.2
SRSF1Q07955 MTF2-210ENST00000489480 1381 ntTSL 1 (best)3.92□□□□□ -1.786e-6■■■■□ 21.2
SRSF1Q07955 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.866e-6■■■■□ 21.2
SRSF1Q07955 ATP5B-203ENST00000547808 705 ntTSL 518.8■□□□□ 0.64e-8■■■■□ 21.2
SRSF1Q07955 ATP5B-210ENST00000552959 1085 ntTSL 318.8■□□□□ 0.64e-8■■■■□ 21.2
SRSF1Q07955 ATP5B-207ENST00000551020 856 ntTSL 317.54■□□□□ 0.44e-8■■■■□ 21.2
SRSF1Q07955 ATP5B-211ENST00000553007 814 ntTSL 517.54■□□□□ 0.44e-8■■■■□ 21.2
SRSF1Q07955 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.024e-8■■■■□ 21.2
SRSF1Q07955 SUPT6H-202ENST00000347486 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.165e-7■■■■□ 21.2
SRSF1Q07955 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.355e-7■■■■□ 21.2
SRSF1Q07955 SFPQ-208ENST00000485365 693 ntTSL 24.63□□□□□ -1.677e-9■■■■□ 21.2
SRSF1Q07955 SFPQ-210ENST00000490668 434 ntTSL 23.79□□□□□ -1.87e-9■■■■□ 21.2
SRSF1Q07955 LIMS1-208ENST00000428064 637 ntTSL 220.3■□□□□ 0.842e-9■■■■□ 21.2
SRSF1Q07955 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.582e-9■■■■□ 21.2
SRSF1Q07955 ZNF655-210ENST00000422647 573 ntTSL 417.38■□□□□ 0.376e-10■■■■□ 21.2
SRSF1Q07955 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.74■□□□□ 0.276e-10■■■■□ 21.2
SRSF1Q07955 ZNF655-206ENST00000416144 1496 ntTSL 316.68■□□□□ 0.266e-10■■■■□ 21.2
SRSF1Q07955 ZNF655-214ENST00000427931 567 ntTSL 416.35■□□□□ 0.216e-10■■■■□ 21.2
SRSF1Q07955 ZNF655-223ENST00000493947 593 ntTSL 416.24■□□□□ 0.196e-10■■■■□ 21.2
SRSF1Q07955 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.196e-10■■■■□ 21.2
SRSF1Q07955 ZNF655-205ENST00000412636 655 ntTSL 216.24■□□□□ 0.196e-10■■■■□ 21.2
SRSF1Q07955 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.08■□□□□ 0.166e-10■■■■□ 21.2
SRSF1Q07955 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.97■□□□□ 0.156e-10■■■■□ 21.2
SRSF1Q07955 ZNF655-217ENST00000452314 545 ntTSL 215.97■□□□□ 0.156e-10■■■■□ 21.2
SRSF1Q07955 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.88■□□□□ 0.136e-10■■■■□ 21.2
SRSF1Q07955 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.79■□□□□ 0.126e-10■■■■□ 21.2
SRSF1Q07955 ZNF655-220ENST00000488751 924 ntTSL 315.32■□□□□ 0.046e-10■■■■□ 21.2
SRSF1Q07955 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.29■□□□□ 0.046e-10■■■■□ 21.2
SRSF1Q07955 ZNF655-208ENST00000422164 793 ntTSL 214.84□□□□□ -0.036e-10■■■■□ 21.2
SRSF1Q07955 ZNF655-211ENST00000423973 1441 ntTSL 1 (best)14.76□□□□□ -0.056e-10■■■■□ 21.2
SRSF1Q07955 ZNF655-219ENST00000467680 1979 ntTSL 213.85□□□□□ -0.196e-10■■■■□ 21.2
SRSF1Q07955 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.56e-10■■■■□ 21.2
SRSF1Q07955 ZNF655-209ENST00000422422 782 ntTSL 311.77□□□□□ -0.536e-10■■■■□ 21.2
SRSF1Q07955 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.636e-10■■■■□ 21.2
SRSF1Q07955 ZNF655-204ENST00000394163 4528 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.946e-10■■■■□ 21.2
SRSF1Q07955 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.166e-10■■■■□ 21.2
SRSF1Q07955 ZNF655-213ENST00000425063 4624 ntTSL 3 BASIC6.75□□□□□ -1.336e-10■■■■□ 21.2
SRSF1Q07955 FANCA-221ENST00000566889 2201 ntTSL 1 (best)19.87■□□□□ 0.772e-8■■■■□ 21.2
SRSF1Q07955 NFKBIA-202ENST00000553342 212 ntTSL 519.04■□□□□ 0.641e-24■■■■□ 21.2
SRSF1Q07955 NFKBIA-205ENST00000555629 599 ntTSL 217.91■□□□□ 0.461e-24■■■■□ 21.2
SRSF1Q07955 NFKBIA-207ENST00000557100 825 ntTSL 316.12■□□□□ 0.171e-24■■■■□ 21.2
SRSF1Q07955 NFKBIA-210ENST00000557459 780 ntTSL 215.18■□□□□ 0.021e-24■■■■□ 21.2
SRSF1Q07955 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.03■□□□□ -02e-8■■■■□ 21.2
SRSF1Q07955 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.031e-24■■■■□ 21.2
SRSF1Q07955 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC14.8□□□□□ -0.042e-8■■■■□ 21.2
SRSF1Q07955 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC14.6□□□□□ -0.072e-8■■■■□ 21.2
SRSF1Q07955 NFKBIA-203ENST00000554001 1396 ntTSL 514.43□□□□□ -0.11e-24■■■■□ 21.2
SRSF1Q07955 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.88□□□□□ -0.192e-8■■■■□ 21.2
SRSF1Q07955 FANCA-218ENST00000565582 812 ntTSL 311.55□□□□□ -0.562e-8■■■■□ 21.2
SRSF1Q07955 NFKBIA-208ENST00000557140 1400 ntTSL 5 BASIC11.52□□□□□ -0.571e-24■■■■□ 21.2
SRSF1Q07955 LIG1-204ENST00000542460 1527 ntTSL 215.16■□□□□ 0.021e-6■■■■□ 21.1
SRSF1Q07955 LIG1-212ENST00000596549 580 ntTSL 412.45□□□□□ -0.421e-6■■■■□ 21.1
SRSF1Q07955 LIG1-217ENST00000599165 570 ntTSL 411.55□□□□□ -0.561e-6■■■■□ 21.1
SRSF1Q07955 ANKRD9-203ENST00000559404 1502 ntTSL 222.09■■□□□ 1.133e-12■■■■□ 21.1
SRSF1Q07955 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.123e-12■■■■□ 21.1
SRSF1Q07955 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.063e-12■■■■□ 21.1
SRSF1Q07955 ANKRD9-202ENST00000557902 620 ntTSL 320.8■□□□□ 0.923e-12■■■■□ 21.1
SRSF1Q07955 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.053e-12■■■■□ 21.1
SRSF1Q07955 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.392e-6■■■■□ 21.1
SRSF1Q07955 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.52e-6■■■■□ 21.1
SRSF1Q07955 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC10.07□□□□□ -0.82e-6■■■■□ 21.1
SRSF1Q07955 KDM3A-205ENST00000441719 8741 ntTSL 28.8□□□□□ -12e-6■■■■□ 21.1
SRSF1Q07955 KDM3A-202ENST00000409064 4621 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.152e-6■■■■□ 21.1
SRSF1Q07955 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC5.7□□□□□ -1.59e-8■■■■□ 21.1
SRSF1Q07955 PNCK-227ENST00000475172 877 ntTSL 522.72■■□□□ 1.231e-7■■■■□ 21.1
SRSF1Q07955 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.941e-7■■■■□ 21.1
SRSF1Q07955 PNCK-225ENST00000473680 1232 ntTSL 220.89■□□□□ 0.931e-7■■■■□ 21.1
SRSF1Q07955 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.53■□□□□ 0.881e-7■■■■□ 21.1
SRSF1Q07955 PNCK-208ENST00000422811 771 ntTSL 318.9■□□□□ 0.621e-7■■■■□ 21.1
SRSF1Q07955 PNCK-220ENST00000465303 868 ntTSL 418.59■□□□□ 0.571e-7■■■■□ 21.1
SRSF1Q07955 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.481e-7■■■■□ 21.1
SRSF1Q07955 PNCK-221ENST00000466074 1564 ntTSL 217.74■□□□□ 0.431e-7■■■■□ 21.1
SRSF1Q07955 PNCK-230ENST00000488168 976 ntTSL 316.85■□□□□ 0.291e-7■■■■□ 21.1
SRSF1Q07955 PNCK-231ENST00000488994 1437 ntTSL 216.37■□□□□ 0.211e-7■■■■□ 21.1
SRSF1Q07955 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.52■□□□□ 0.071e-7■■■■□ 21.1
SRSF1Q07955 PNCK-222ENST00000466638 1204 ntTSL 215.18■□□□□ 0.021e-7■■■■□ 21.1
SRSF1Q07955 PNCK-214ENST00000439087 754 ntTSL 514.63□□□□□ -0.071e-7■■■■□ 21.1
SRSF1Q07955 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.62□□□□□ -0.071e-7■■■■□ 21.1
SRSF1Q07955 PNCK-232ENST00000489536 836 ntTSL 214□□□□□ -0.171e-7■■■■□ 21.1
SRSF1Q07955 PNCK-211ENST00000433470 717 ntTSL 513.88□□□□□ -0.191e-7■■■■□ 21.1
SRSF1Q07955 PNCK-224ENST00000472324 2143 ntTSL 1 (best)13.39□□□□□ -0.271e-7■■■■□ 21.1
SRSF1Q07955 PNCK-205ENST00000411968 557 ntTSL 59.82□□□□□ -0.841e-7■■■■□ 21.1
SRSF1Q07955 THOP1-212ENST00000591149 789 ntTSL 316■□□□□ 0.152e-16■■■■□ 21.1
SRSF1Q07955 THOP1-210ENST00000590533 616 ntTSL 215.92■□□□□ 0.142e-16■■■■□ 21.1
SRSF1Q07955 TIMELESS-202ENST00000553314 511 ntTSL 38.08□□□□□ -1.125e-6■■■■□ 21.1
SRSF1Q07955 ABCF2-203ENST00000441774 941 ntTSL 319.13■□□□□ 0.653e-6■■■■□ 21
SRSF1Q07955 ABCF2-201ENST00000222388 2185 ntTSL 5 BASIC10.36□□□□□ -0.753e-6■■■■□ 21
SRSF1Q07955 ABCF2-204ENST00000468073 1031 ntTSL 29.59□□□□□ -0.873e-6■■■■□ 21
SRSF1Q07955 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.283e-6■■■■□ 21
SRSF1Q07955 WSB1-207ENST00000579733 1670 ntTSL 1 (best) BASIC10.73□□□□□ -0.699e-9■■■■□ 21
SRSF1Q07955 GOLGA2-207ENST00000470630 550 ntTSL 311.61□□□□□ -0.558e-8■■■■□ 21
Retrieved 100 of 14,836 protein–RNA pairs in 126.4 ms