RNA–Protein interactions for RNA: ENST00000485365.1

SFPQ-208, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 693 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-208ENST00000485365 AEBP2Q6ZN18 517 aaPredicted RBP31.18■■■□□ 2.58
SFPQ-208ENST00000485365 CHIC1Q5VXU3 224 aa29.39■■■□□ 2.3
SFPQ-208ENST00000485365 SENP3Q9H4L4 574 aaPredicted RBP26.58■■□□□ 1.85
SFPQ-208ENST00000485365 PHF23Q9BUL5 403 aaPredicted RBP26.22■■□□□ 1.79
SFPQ-208ENST00000485365 FOXD1Q16676 465 aa24.83■■□□□ 1.57
SFPQ-208ENST00000485365 PLPPR3Q6T4P5 718 aa23.37■■□□□ 1.33
SFPQ-208ENST00000485365 MSH5O43196 834 aa23.27■■□□□ 1.32
SFPQ-208ENST00000485365 PIAS4Q8N2W9 510 aaPredicted RBP23.13■■□□□ 1.29
SFPQ-208ENST00000485365 POTEDQ86YR6 584 aa23.09■■□□□ 1.29
SFPQ-208ENST00000485365 PPP6R1Q9UPN7 881 aa23.07■■□□□ 1.28
SFPQ-208ENST00000485365 ADRA2BP18089 450 aa22.97■■□□□ 1.27
SFPQ-208ENST00000485365 MAPK8IP2Q13387 824 aaPredicted RBP21.17■□□□□ 0.98
SFPQ-208ENST00000485365 DMRT2Q9Y5R5 561 aa21.06■□□□□ 0.96
SFPQ-208ENST00000485365 SCAF1Q9H7N4 1312 aaKnown RBP20.97■□□□□ 0.95
SFPQ-208ENST00000485365 PPP4R3CPQ6ZMV5 832 aa20.47■□□□□ 0.87
SFPQ-208ENST00000485365 HOXD11P31277 338 aaPredicted RBP20.22■□□□□ 0.83
SFPQ-208ENST00000485365 DCAF8L1A6NGE4 600 aa20.18■□□□□ 0.82
SFPQ-208ENST00000485365 CNKSR2Q8WXI2 1034 aa20.12■□□□□ 0.81
SFPQ-208ENST00000485365 CACNB1Q02641 598 aaPredicted RBP20.1■□□□□ 0.81
SFPQ-208ENST00000485365 RNF216Q9NWF9 866 aaPredicted RBP20■□□□□ 0.79
SFPQ-208ENST00000485365 RNF39Q9H2S5 420 aa19.87■□□□□ 0.77
SFPQ-208ENST00000485365 NCBP3Q53F19 620 aaKnown RBP19.59■□□□□ 0.73
SFPQ-208ENST00000485365 C1QBPQ07021 282 aaKnown RBP19.54■□□□□ 0.72
SFPQ-208ENST00000485365 DNAJC5BQ9UF47 199 aa19.54■□□□□ 0.72
SFPQ-208ENST00000485365 NPM3O75607 178 aaKnown RBP19.36■□□□□ 0.69
SFPQ-208ENST00000485365 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.23■□□□□ 0.674e-12■□□□□ 10
SFPQ-208ENST00000485365 U3KPZ7 1027 aaPredicted RBP18.85■□□□□ 0.61
SFPQ-208ENST00000485365 KCNA4P22459 653 aa18.81■□□□□ 0.6
SFPQ-208ENST00000485365 SPINK5Q9NQ38 1064 aaPredicted RBP18.63■□□□□ 0.57
SFPQ-208ENST00000485365 CAPN15O75808 1086 aa18.58■□□□□ 0.56
SFPQ-208ENST00000485365 SLC4A2P04920 1241 aa18.55■□□□□ 0.56
SFPQ-208ENST00000485365 DSG3P32926 999 aa18.54■□□□□ 0.56
SFPQ-208ENST00000485365 TRHP20396 242 aaPredicted RBP18.23■□□□□ 0.51
SFPQ-208ENST00000485365 APLP2Q06481 763 aa18.23■□□□□ 0.51
SFPQ-208ENST00000485365 ZNF219Q9P2Y4 722 aaPredicted RBP18.19■□□□□ 0.5
SFPQ-208ENST00000485365 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.18■□□□□ 0.5
SFPQ-208ENST00000485365 HNRNPUL2Q1KMD3 747 aaKnown RBP18.18■□□□□ 0.5
SFPQ-208ENST00000485365 ABCB7O75027 752 aa18.15■□□□□ 0.5
SFPQ-208ENST00000485365 SAMD1Q6SPF0 538 aaPredicted RBP18.09■□□□□ 0.49
SFPQ-208ENST00000485365 POTEHQ6S545 545 aa18.04■□□□□ 0.48
SFPQ-208ENST00000485365 MYCNP04198 464 aaPredicted RBP17.88■□□□□ 0.45
SFPQ-208ENST00000485365 POLA2Q14181 598 aa17.7■□□□□ 0.42
SFPQ-208ENST00000485365 SLC4A1APQ9BWU0 796 aaKnown RBP17.7■□□□□ 0.42
SFPQ-208ENST00000485365 RBM42Q9BTD8 480 aaKnown RBP17.66■□□□□ 0.42
SFPQ-208ENST00000485365 FOXD4L1Q9NU39 408 aa17.6■□□□□ 0.41
SFPQ-208ENST00000485365 ATF5Q9Y2D1 282 aaPredicted RBP17.53■□□□□ 0.4
SFPQ-208ENST00000485365 CHRDL2Q6WN34 429 aa17.37■□□□□ 0.37
SFPQ-208ENST00000485365 ZBTB22O15209 634 aa17.32■□□□□ 0.36
SFPQ-208ENST00000485365 ZBTB12Q9Y330 459 aaPredicted RBP17.31■□□□□ 0.36
SFPQ-208ENST00000485365 AKT1S1Q96B36 256 aa17.22■□□□□ 0.35
SFPQ-208ENST00000485365 OSCARQ8IYS5 282 aa17.17■□□□□ 0.34
SFPQ-208ENST00000485365 REM2Q8IYK8 340 aaPredicted RBP17.08■□□□□ 0.32
SFPQ-208ENST00000485365 ATXN8OSP0DMR3 200 aa17.06■□□□□ 0.32
SFPQ-208ENST00000485365 PIP4P2Q8N4L2 257 aa16.93■□□□□ 0.3
SFPQ-208ENST00000485365 PITPNM1O00562 1244 aa16.91■□□□□ 0.3
SFPQ-208ENST00000485365 SP7Q8TDD2 431 aaPredicted RBP16.82■□□□□ 0.28
SFPQ-208ENST00000485365 FBLN2P98095 1184 aa16.8■□□□□ 0.28
SFPQ-208ENST00000485365 FXR2P51116 673 aaKnown RBP eCLIP16.79■□□□□ 0.28
SFPQ-208ENST00000485365 SPDYE2BA6NHP3 402 aa16.77■□□□□ 0.28
SFPQ-208ENST00000485365 SPDYE6P0CI01 402 aa16.77■□□□□ 0.28
SFPQ-208ENST00000485365 SPDYE2Q495Y8 402 aa16.77■□□□□ 0.28
SFPQ-208ENST00000485365 MKRN4PQ13434 485 aaPredicted RBP16.71■□□□□ 0.27
SFPQ-208ENST00000485365 HAX1O00165 279 aa16.65■□□□□ 0.26
SFPQ-208ENST00000485365 SSUH2Q9Y2M2 353 aa16.56■□□□□ 0.24
SFPQ-208ENST00000485365 ZNF692Q9BU19 519 aaPredicted RBP16.54■□□□□ 0.24
SFPQ-208ENST00000485365 SPDYE1Q8NFV5 336 aaPredicted RBP16.52■□□□□ 0.24
SFPQ-208ENST00000485365 CLEC11AQ9Y240 323 aa16.51■□□□□ 0.23
SFPQ-208ENST00000485365 EVX2Q03828 476 aa16.47■□□□□ 0.23
SFPQ-208ENST00000485365 PRKAR2AP13861 404 aaKnown RBP16.45■□□□□ 0.22
SFPQ-208ENST00000485365 CSRNP3Q8WYN3 585 aa16.32■□□□□ 0.2
SFPQ-208ENST00000485365 PABPN1Q86U42 306 aaKnown RBP eCLIP16.3■□□□□ 0.2
SFPQ-208ENST00000485365 C19orf67A6NJJ6 358 aa16.27■□□□□ 0.2
SFPQ-208ENST00000485365 CHADLQ6NUI6 762 aa16.24■□□□□ 0.19
SFPQ-208ENST00000485365 PRR29P0C7W0 189 aa16.2■□□□□ 0.18
SFPQ-208ENST00000485365 GABBR2O75899 941 aa16.07■□□□□ 0.16
SFPQ-208ENST00000485365 EHMT2Q96KQ7 1210 aa15.99■□□□□ 0.15
SFPQ-208ENST00000485365 FARP1Q9Y4F1 1045 aaPredicted RBP15.97■□□□□ 0.15
SFPQ-208ENST00000485365 CD44P16070 742 aaKnown RBP15.92■□□□□ 0.14
SFPQ-208ENST00000485365 SPDYE4A6NLX3 237 aa15.79■□□□□ 0.12
SFPQ-208ENST00000485365 CREBZFQ9NS37 354 aa15.79■□□□□ 0.12
SFPQ-208ENST00000485365 STAG3Q9UJ98 1225 aa15.78■□□□□ 0.12
SFPQ-208ENST00000485365 POTEIP0CG38 1075 aa15.76■□□□□ 0.11
SFPQ-208ENST00000485365 LHX8Q68G74 356 aa15.76■□□□□ 0.11
SFPQ-208ENST00000485365 CLCN6P51797 869 aa15.7■□□□□ 0.1
SFPQ-208ENST00000485365 ZNF579Q8NAF0 562 aaKnown RBP15.68■□□□□ 0.1
SFPQ-208ENST00000485365 ZRANB1Q9UGI0 708 aa15.66■□□□□ 0.1
SFPQ-208ENST00000485365 DCBLD2Q96PD2 775 aa15.57■□□□□ 0.08
SFPQ-208ENST00000485365 MNX1P50219 401 aaPredicted RBP15.51■□□□□ 0.07
SFPQ-208ENST00000485365 GALR2O43603 387 aaPredicted RBP15.5■□□□□ 0.07
SFPQ-208ENST00000485365 PAK3O75914 559 aaPredicted RBP15.46■□□□□ 0.07
SFPQ-208ENST00000485365 NPM1P06748 294 aaKnown RBP eCLIP15.45■□□□□ 0.06
SFPQ-208ENST00000485365 PHF12Q96QT6 1004 aa15.45■□□□□ 0.06
SFPQ-208ENST00000485365 PROM2Q8N271 834 aa15.41■□□□□ 0.06
SFPQ-208ENST00000485365 PELP1Q8IZL8 1130 aaKnown RBP15.24■□□□□ 0.03
SFPQ-208ENST00000485365 MS4A3Q96HJ5 214 aa15.24■□□□□ 0.03
SFPQ-208ENST00000485365 POTEB2H3BUK9 544 aa15.23■□□□□ 0.03
SFPQ-208ENST00000485365 OTUD5Q96G74 571 aa15.2■□□□□ 0.02
SFPQ-208ENST00000485365 TSPYL2Q9H2G4 693 aaPredicted RBP15.18■□□□□ 0.02
SFPQ-208ENST00000485365 ASTLQ6HA08 431 aaPredicted RBP15.17■□□□□ 0.02
SFPQ-208ENST00000485365 CCDC61Q9Y6R9 512 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms