RNA–Protein interactions for RNA: ENST00000490668.5

SFPQ-210, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 434 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-210ENST00000490668 CHIC1Q5VXU3 224 aa11.69□□□□□ -0.54
SFPQ-210ENST00000490668 AEBP2Q6ZN18 517 aaPredicted RBP11.27□□□□□ -0.61
SFPQ-210ENST00000490668 PHF23Q9BUL5 403 aaPredicted RBP10.45□□□□□ -0.74
SFPQ-210ENST00000490668 NISCHQ9Y2I1 1504 aa10.22□□□□□ -0.77
SFPQ-210ENST00000490668 PLPPR3Q6T4P5 718 aa9.78□□□□□ -0.84
SFPQ-210ENST00000490668 EHMT2Q96KQ7 1210 aa9.78□□□□□ -0.84
SFPQ-210ENST00000490668 KCNA4P22459 653 aa9.49□□□□□ -0.89
SFPQ-210ENST00000490668 SLC24A1O60721 1099 aa9.47□□□□□ -0.89
SFPQ-210ENST00000490668 CSRNP3Q8WYN3 585 aa9.36□□□□□ -0.91
SFPQ-210ENST00000490668 SENP3Q9H4L4 574 aaPredicted RBP9.3□□□□□ -0.92
SFPQ-210ENST00000490668 ADRA2BP18089 450 aa9.26□□□□□ -0.93
SFPQ-210ENST00000490668 SLC4A1APQ9BWU0 796 aaKnown RBP9.12□□□□□ -0.95
SFPQ-210ENST00000490668 CCDC180Q9P1Z9 1646 aa9.11□□□□□ -0.95
SFPQ-210ENST00000490668 RTN4Q9NQC3 1192 aaKnown RBP9.06□□□□□ -0.96
SFPQ-210ENST00000490668 PPP6R1Q9UPN7 881 aa8.96□□□□□ -0.98
SFPQ-210ENST00000490668 AMER1Q5JTC6 1135 aaPredicted RBP8.94□□□□□ -0.98
SFPQ-210ENST00000490668 ZBTB22O15209 634 aa8.82□□□□□ -1
SFPQ-210ENST00000490668 ABCC9O60706 1549 aa8.79□□□□□ -1
SFPQ-210ENST00000490668 PPP4R3CPQ6ZMV5 832 aa8.76□□□□□ -1.01
SFPQ-210ENST00000490668 NPM3O75607 178 aaKnown RBP8.66□□□□□ -1.02
SFPQ-210ENST00000490668 NCBP3Q53F19 620 aaKnown RBP8.66□□□□□ -1.02
SFPQ-210ENST00000490668 FOXD1Q16676 465 aa8.62□□□□□ -1.03
SFPQ-210ENST00000490668 ZCCHC6Q5VYS8 1495 aaKnown RBP8.56□□□□□ -1.04
SFPQ-210ENST00000490668 NACADO15069 1562 aa8.52□□□□□ -1.05
SFPQ-210ENST00000490668 RB1CC1Q8TDY2 1594 aa8.52□□□□□ -1.05
SFPQ-210ENST00000490668 MYO15BQ96JP2 1530 aa8.49□□□□□ -1.05
SFPQ-210ENST00000490668 DCAF1Q9Y4B6 1507 aa8.48□□□□□ -1.05
SFPQ-210ENST00000490668 FOXD4L1Q9NU39 408 aa8.45□□□□□ -1.06
SFPQ-210ENST00000490668 DCAF8L2P0C7V8 631 aa8.44□□□□□ -1.06
SFPQ-210ENST00000490668 FKBP8Q14318 412 aa8.35□□□□□ -1.07
SFPQ-210ENST00000490668 PRKCSHP14314 528 aaPredicted RBP8.34□□□□□ -1.07
SFPQ-210ENST00000490668 CNKSR2Q8WXI2 1034 aa8.31□□□□□ -1.08
SFPQ-210ENST00000490668 SCRIBQ14160 1630 aa8.29□□□□□ -1.08
SFPQ-210ENST00000490668 DNAJC5BQ9UF47 199 aa8.29□□□□□ -1.08
SFPQ-210ENST00000490668 UNC13AQ9UPW8 1703 aa8.28□□□□□ -1.08
SFPQ-210ENST00000490668 PIAS4Q8N2W9 510 aaPredicted RBP8.26□□□□□ -1.09
SFPQ-210ENST00000490668 PLCB2Q00722 1185 aa8.25□□□□□ -1.09
SFPQ-210ENST00000490668 SHROOM4Q9ULL8 1493 aa8.22□□□□□ -1.09
SFPQ-210ENST00000490668 BICRAQ9NZM4 1560 aa8.21□□□□□ -1.1
SFPQ-210ENST00000490668 TAOK2Q9UL54 1235 aa8.2□□□□□ -1.1
SFPQ-210ENST00000490668 BCANQ96GW7 911 aa8.18□□□□□ -1.1
SFPQ-210ENST00000490668 PABPN1Q86U42 306 aaKnown RBP eCLIP8.16□□□□□ -1.1
SFPQ-210ENST00000490668 HAP1P54257 671 aaPredicted RBP8.1□□□□□ -1.11
SFPQ-210ENST00000490668 ATXN8OSP0DMR3 200 aa8.07□□□□□ -1.12
SFPQ-210ENST00000490668 DAXXQ9UER7 740 aaPredicted RBP8.06□□□□□ -1.12
SFPQ-210ENST00000490668 TPRNQ4KMQ1 711 aa8.05□□□□□ -1.12
SFPQ-210ENST00000490668 SCAF1Q9H7N4 1312 aaKnown RBP8.03□□□□□ -1.12
SFPQ-210ENST00000490668 SLC4A2P04920 1241 aa8.03□□□□□ -1.12
SFPQ-210ENST00000490668 EIF4G1Q04637 1599 aaKnown RBP8.02□□□□□ -1.13
SFPQ-210ENST00000490668 VSIG10Q8N0Z9 540 aa8.01□□□□□ -1.13
SFPQ-210ENST00000490668 TIMELESSQ9UNS1 1208 aa7.98□□□□□ -1.13
SFPQ-210ENST00000490668 RNF216Q9NWF9 866 aaPredicted RBP7.96□□□□□ -1.14
SFPQ-210ENST00000490668 CC2D2AQ9P2K1 1620 aa7.96□□□□□ -1.14
SFPQ-210ENST00000490668 BAZ1AQ9NRL2 1556 aaPredicted RBP7.95□□□□□ -1.14
SFPQ-210ENST00000490668 SMARCA4P51532 1647 aa7.93□□□□□ -1.14
SFPQ-210ENST00000490668 MYCNP04198 464 aaPredicted RBP7.92□□□□□ -1.14
SFPQ-210ENST00000490668 MAPK8IP2Q13387 824 aaPredicted RBP7.92□□□□□ -1.14
SFPQ-210ENST00000490668 KDM2AQ9Y2K7 1162 aa7.92□□□□□ -1.14
SFPQ-210ENST00000490668 CECR2Q9BXF3 1484 aa7.92□□□□□ -1.14
SFPQ-210ENST00000490668 ARXQ96QS3 562 aa7.91□□□□□ -1.14
SFPQ-210ENST00000490668 SMARCA2P51531 1590 aa7.88□□□□□ -1.15
SFPQ-210ENST00000490668 TULP1O00294 542 aaPredicted RBP7.88□□□□□ -1.15
SFPQ-210ENST00000490668 MROH2BQ7Z745 1585 aa7.86□□□□□ -1.15
SFPQ-210ENST00000490668 PEG3Q9GZU2 1588 aa7.85□□□□□ -1.15
SFPQ-210ENST00000490668 FBLN2P98095 1184 aa7.85□□□□□ -1.15
SFPQ-210ENST00000490668 HMGXB3Q12766 1538 aa7.84□□□□□ -1.15
SFPQ-210ENST00000490668 ATAD2BQ9ULI0 1458 aa7.84□□□□□ -1.15
SFPQ-210ENST00000490668 NCAPD3P42695 1498 aa7.82□□□□□ -1.16
SFPQ-210ENST00000490668 BAZ1BQ9UIG0 1483 aaKnown RBP7.82□□□□□ -1.16
SFPQ-210ENST00000490668 RSF1Q96T23 1441 aaPredicted RBP7.79□□□□□ -1.16
SFPQ-210ENST00000490668 WIZO95785 1651 aa7.78□□□□□ -1.16
SFPQ-210ENST00000490668 PKD2Q13563 968 aa7.77□□□□□ -1.17
SFPQ-210ENST00000490668 ATF5Q9Y2D1 282 aaPredicted RBP7.77□□□□□ -1.17
SFPQ-210ENST00000490668 GTF3C3Q9Y5Q9 886 aa7.77□□□□□ -1.17
SFPQ-210ENST00000490668 HOXD11P31277 338 aaPredicted RBP7.76□□□□□ -1.17
SFPQ-210ENST00000490668 TOP2AP11388 1531 aaKnown RBP7.75□□□□□ -1.17
SFPQ-210ENST00000490668 FBXO3Q9UK99 471 aa7.75□□□□□ -1.17
SFPQ-210ENST00000490668 VASPP50552 380 aaPredicted RBP7.71□□□□□ -1.18
SFPQ-210ENST00000490668 IFNLR1Q8IU57 520 aaPredicted RBP7.71□□□□□ -1.18
SFPQ-210ENST00000490668 BBXQ8WY36 941 aaPredicted RBP7.7□□□□□ -1.18
SFPQ-210ENST00000490668 NPM1P06748 294 aaKnown RBP eCLIP7.69□□□□□ -1.18
SFPQ-210ENST00000490668 PAXIP1Q6ZW49 1069 aaPredicted RBP7.68□□□□□ -1.18
SFPQ-210ENST00000490668 HOMEZQ8IX15 550 aa7.68□□□□□ -1.18
SFPQ-210ENST00000490668 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.67□□□□□ -1.18
SFPQ-210ENST00000490668 ERICH6Q7L0X2 663 aa7.65□□□□□ -1.18
SFPQ-210ENST00000490668 PROM2Q8N271 834 aa7.65□□□□□ -1.18
SFPQ-210ENST00000490668 LAMC3Q9Y6N6 1575 aa7.65□□□□□ -1.18
SFPQ-210ENST00000490668 CFAP44Q96MT7 982 aa7.64□□□□□ -1.19
SFPQ-210ENST00000490668 TSHZ2Q9NRE2 1034 aa7.64□□□□□ -1.19
SFPQ-210ENST00000490668 TMEM132AQ24JP5 1023 aa7.63□□□□□ -1.19
SFPQ-210ENST00000490668 SUPT5HO00267 1087 aaKnown RBP7.62□□□□□ -1.19
SFPQ-210ENST00000490668 ERCC6Q03468 1493 aa7.61□□□□□ -1.19
SFPQ-210ENST00000490668 NESP48681 1621 aa7.6□□□□□ -1.19
SFPQ-210ENST00000490668 CCDC88BA6NC98 1476 aa7.6□□□□□ -1.19
SFPQ-210ENST00000490668 CADPSQ9ULU8 1353 aa7.59□□□□□ -1.19
SFPQ-210ENST00000490668 DNAJC5Q9H3Z4 198 aa7.59□□□□□ -1.19
SFPQ-210ENST00000490668 DMRT2Q9Y5R5 561 aa7.59□□□□□ -1.19
SFPQ-210ENST00000490668 CFTRP13569 1480 aa7.58□□□□□ -1.2
SFPQ-210ENST00000490668 SPDYE4A6NLX3 237 aa7.58□□□□□ -1.2
SFPQ-210ENST00000490668 PDS5BQ9NTI5 1447 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms