Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PER3P56645 AC004448.1-201ENST00000458332 883 ntBASIC20.82■□□□□ 0.92
PER3P56645 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.82■□□□□ 0.92
PER3P56645 SNX5-217ENST00000606557 1087 ntBASIC20.82■□□□□ 0.92
PER3P56645 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.82■□□□□ 0.92
PER3P56645 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PER3P56645 AC068473.5-201ENST00000616428 2072 ntBASIC20.82■□□□□ 0.92
PER3P56645 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PER3P56645 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
PER3P56645 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PER3P56645 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PER3P56645 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PER3P56645 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PER3P56645 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PER3P56645 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.81■□□□□ 0.92
PER3P56645 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PER3P56645 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PER3P56645 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PER3P56645 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.81■□□□□ 0.92
PER3P56645 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PER3P56645 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PER3P56645 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PER3P56645 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PER3P56645 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PER3P56645 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PER3P56645 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PER3P56645 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PER3P56645 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PER3P56645 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.8■□□□□ 0.92
PER3P56645 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.8■□□□□ 0.92
PER3P56645 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
PER3P56645 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PER3P56645 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.8■□□□□ 0.92
PER3P56645 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PER3P56645 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
PER3P56645 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.79■□□□□ 0.92
PER3P56645 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
PER3P56645 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PER3P56645 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PER3P56645 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PER3P56645 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PER3P56645 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.79■□□□□ 0.92
PER3P56645 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PER3P56645 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PER3P56645 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PER3P56645 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PER3P56645 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PER3P56645 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PER3P56645 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PER3P56645 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PER3P56645 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PER3P56645 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PER3P56645 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PER3P56645 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PER3P56645 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.78■□□□□ 0.92
PER3P56645 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.78■□□□□ 0.92
PER3P56645 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.78■□□□□ 0.92
PER3P56645 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
PER3P56645 AC092171.4-201ENST00000609130 632 ntBASIC20.78■□□□□ 0.92
PER3P56645 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.78■□□□□ 0.92
PER3P56645 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.78■□□□□ 0.92
PER3P56645 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PER3P56645 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PER3P56645 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PER3P56645 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.78■□□□□ 0.92
PER3P56645 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PER3P56645 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PER3P56645 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PER3P56645 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PER3P56645 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.77■□□□□ 0.92
PER3P56645 AF213884.3-201ENST00000563833 479 ntBASIC20.77■□□□□ 0.92
PER3P56645 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.77■□□□□ 0.92
PER3P56645 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.77■□□□□ 0.92
PER3P56645 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.77■□□□□ 0.92
PER3P56645 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PER3P56645 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PER3P56645 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PER3P56645 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PER3P56645 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PER3P56645 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.76■□□□□ 0.91
PER3P56645 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.76■□□□□ 0.91
PER3P56645 MIR6821-201ENST00000617625 74 ntBASIC20.76■□□□□ 0.91
PER3P56645 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.76■□□□□ 0.91
PER3P56645 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PER3P56645 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PER3P56645 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.75■□□□□ 0.91
PER3P56645 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PER3P56645 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PER3P56645 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PER3P56645 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.75■□□□□ 0.91
PER3P56645 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.75■□□□□ 0.91
PER3P56645 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PER3P56645 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PER3P56645 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PER3P56645 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PER3P56645 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PER3P56645 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
PER3P56645 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.74■□□□□ 0.91
PER3P56645 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PER3P56645 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms