Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 MRP17YKL003C 396 nt6.6□□□□□ -1.35
UFD2P54860 ACS1YAL054C 2142 nt6.6□□□□□ -1.35
UFD2P54860 MTD1YKR080W 963 nt6.6□□□□□ -1.35
UFD2P54860 YLR163W-AYLR163W-A 114 nt6.6□□□□□ -1.35
UFD2P54860 YMR084WYMR084W 789 nt6.6□□□□□ -1.35
UFD2P54860 ROT1YMR200W 771 nt6.6□□□□□ -1.35
UFD2P54860 LST8YNL006W 912 nt6.6□□□□□ -1.35
UFD2P54860 YNR075C-AYNR075C-A 93 nt6.6□□□□□ -1.35
UFD2P54860 ARO4YBR249C 1113 nt6.6□□□□□ -1.35
UFD2P54860 MEK1YOR351C 1494 nt6.6□□□□□ -1.35
UFD2P54860 HMS1YOR032C 1305 nt6.59□□□□□ -1.35
UFD2P54860 YDL186WYDL186W 834 nt6.59□□□□□ -1.35
UFD2P54860 YIL102C-AYIL102C-A 228 nt6.59□□□□□ -1.35
UFD2P54860 TTI2YJR136C 1266 nt6.59□□□□□ -1.35
UFD2P54860 STM1YLR150W 822 nt6.59□□□□□ -1.35
UFD2P54860 TAP42YMR028W 1101 nt6.59□□□□□ -1.35
UFD2P54860 END3YNL084C 1050 nt6.59□□□□□ -1.35
UFD2P54860 RBD2YPL246C 789 nt6.59□□□□□ -1.35
UFD2P54860 RPN7YPR108W 1290 nt6.59□□□□□ -1.35
UFD2P54860 EFT2YDR385W 2529 nt6.59□□□□□ -1.35
UFD2P54860 EFT1YOR133W 2529 nt6.59□□□□□ -1.35
UFD2P54860 PUS9YDL036C 1389 nt6.58□□□□□ -1.36
UFD2P54860 CHL4YDR254W 1377 nt6.58□□□□□ -1.36
UFD2P54860 MTQ2YDR140W 666 nt6.58□□□□□ -1.36
UFD2P54860 ASP1YDR321W 1146 nt6.58□□□□□ -1.36
UFD2P54860 YFR057WYFR057W 456 nt6.58□□□□□ -1.36
UFD2P54860 RPS2YGL123W 765 nt6.58□□□□□ -1.36
UFD2P54860 YHR069C-AYHR069C-A 363 nt6.58□□□□□ -1.36
UFD2P54860 YML6YML025C 861 nt6.58□□□□□ -1.36
UFD2P54860 IZH4YOL101C 939 nt6.58□□□□□ -1.36
UFD2P54860 NUP1YOR098C 3231 nt6.58□□□□□ -1.36
UFD2P54860 FUM1YPL262W 1467 nt6.58□□□□□ -1.36
UFD2P54860 RAD57YDR004W 1383 nt6.57□□□□□ -1.36
UFD2P54860 YDL124WYDL124W 939 nt6.57□□□□□ -1.36
UFD2P54860 IPK1YDR315C 846 nt6.57□□□□□ -1.36
UFD2P54860 CAD1YDR423C 1230 nt6.57□□□□□ -1.36
UFD2P54860 BTN2YGR142W 1233 nt6.57□□□□□ -1.36
UFD2P54860 PSF2YJL072C 642 nt6.57□□□□□ -1.36
UFD2P54860 TAL1YLR354C 1008 nt6.57□□□□□ -1.36
UFD2P54860 MDM12YOL009C 816 nt6.57□□□□□ -1.36
UFD2P54860 MRP2YPR166C 348 nt6.57□□□□□ -1.36
UFD2P54860 SHM1YBR263W 1473 nt6.56□□□□□ -1.36
UFD2P54860 YDR154CYDR154C 351 nt6.56□□□□□ -1.36
UFD2P54860 YDR445CYDR445C 408 nt6.56□□□□□ -1.36
UFD2P54860 CAB1YDR531W 1104 nt6.56□□□□□ -1.36
UFD2P54860 YER148W-AYER148W-A 579 nt6.56□□□□□ -1.36
UFD2P54860 YER186CYER186C 921 nt6.56□□□□□ -1.36
UFD2P54860 MRPS35YGR165W 1038 nt6.56□□□□□ -1.36
UFD2P54860 SMD2YLR275W 333 nt6.56□□□□□ -1.36
UFD2P54860 YNL171CYNL171C 369 nt6.56□□□□□ -1.36
UFD2P54860 MVD1YNR043W 1191 nt6.56□□□□□ -1.36
UFD2P54860 GSP2YOR185C 663 nt6.56□□□□□ -1.36
UFD2P54860 RDL2YOR286W 450 nt6.56□□□□□ -1.36
UFD2P54860 MUM2YBR057C 1101 nt6.56□□□□□ -1.36
UFD2P54860 YBR124WYBR124W 360 nt6.56□□□□□ -1.36
UFD2P54860 PRM2YIL037C 1971 nt6.56□□□□□ -1.36
UFD2P54860 RSC30YHR056C 2652 nt6.55□□□□□ -1.36
UFD2P54860 HSP78YDR258C 2436 nt6.55□□□□□ -1.36
UFD2P54860 RHB1YCR027C 630 nt6.55□□□□□ -1.36
UFD2P54860 DCN1YLR128W 810 nt6.55□□□□□ -1.36
UFD2P54860 REH1YLR387C 1299 nt6.55□□□□□ -1.36
UFD2P54860 YBL068W-AYBL068W-A 237 nt6.55□□□□□ -1.36
UFD2P54860 VMA4YOR332W 702 nt6.55□□□□□ -1.36
UFD2P54860 ARR3YPR201W 1215 nt6.55□□□□□ -1.36
UFD2P54860 YER010CYER010C 705 nt6.54□□□□□ -1.36
UFD2P54860 YGL072CYGL072C 360 nt6.54□□□□□ -1.36
UFD2P54860 RFA3YJL173C 369 nt6.54□□□□□ -1.36
UFD2P54860 YJR071WYJR071W 369 nt6.54□□□□□ -1.36
UFD2P54860 TIS11YLR136C 858 nt6.54□□□□□ -1.36
UFD2P54860 PML39YML107C 1005 nt6.54□□□□□ -1.36
UFD2P54860 GYP1YOR070C 1914 nt6.54□□□□□ -1.36
UFD2P54860 SMP1YBR182C 1359 nt6.54□□□□□ -1.36
UFD2P54860 QNS1YHR074W 2145 nt6.53□□□□□ -1.36
UFD2P54860 SIR1YKR101W 1965 nt6.53□□□□□ -1.36
UFD2P54860 HIS7YBR248C 1659 nt6.53□□□□□ -1.36
UFD2P54860 DET1YDR051C 1005 nt6.53□□□□□ -1.36
UFD2P54860 EFM4YIL064W 774 nt6.53□□□□□ -1.36
UFD2P54860 RPL10YLR075W 666 nt6.53□□□□□ -1.36
UFD2P54860 YBL070CYBL070C 321 nt6.53□□□□□ -1.36
UFD2P54860 YNL162W-AYNL162W-A 219 nt6.53□□□□□ -1.36
UFD2P54860 YBR134WYBR134W 402 nt6.53□□□□□ -1.36
UFD2P54860 HST1YOL068C 1512 nt6.53□□□□□ -1.36
UFD2P54860 PYC1YGL062W 3537 nt6.53□□□□□ -1.36
UFD2P54860 CNA1YLR433C 1662 nt6.52□□□□□ -1.37
UFD2P54860 UBP8YMR223W 1416 nt6.52□□□□□ -1.37
UFD2P54860 DBP5YOR046C 1449 nt6.52□□□□□ -1.37
UFD2P54860 YME1YPR024W 2244 nt6.52□□□□□ -1.37
UFD2P54860 COX9YDL067C 180 nt6.52□□□□□ -1.37
UFD2P54860 YFL019CYFL019C 354 nt6.52□□□□□ -1.37
UFD2P54860 VMA16YHR026W 642 nt6.52□□□□□ -1.37
UFD2P54860 YKR070WYKR070W 1059 nt6.52□□□□□ -1.37
UFD2P54860 SEC72YLR292C 582 nt6.52□□□□□ -1.37
UFD2P54860 YBL094CYBL094C 333 nt6.52□□□□□ -1.37
UFD2P54860 RFM1YOR279C 933 nt6.52□□□□□ -1.37
UFD2P54860 BSD2YBR290W 966 nt6.52□□□□□ -1.37
UFD2P54860 UBP9YER098W 2265 nt6.52□□□□□ -1.37
UFD2P54860 EUG1YDR518W 1554 nt6.52□□□□□ -1.37
UFD2P54860 VPS4YPR173C 1314 nt6.51□□□□□ -1.37
UFD2P54860 VMS1YDR049W 1899 nt6.51□□□□□ -1.37
UFD2P54860 YRF1-4YLR466W 4149 nt6.51□□□□□ -1.37
Retrieved 100 of 7,029 protein–RNA pairs in 18.2 ms