RNA–Protein interactions for RNA: YKR080W

MTD1, Transcript of NAD-dependent 5,10-methylenetetrahydrafolate dehydrogenase, yeastyeast

Gene MTD1, Length 963 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MTD1YKR080W DRS1P32892 752 aaKnown RBP13.55□□□□□ -0.24
MTD1YKR080W MTC1P47018 478 aaKnown RBP13.39□□□□□ -0.27
MTD1YKR080W BFR2Q06631 534 aaKnown RBP11.77□□□□□ -0.53
MTD1YKR080W DIP2Q12220 943 aaPredicted RBP11.5□□□□□ -0.57
MTD1YKR080W AVT3P36062 692 aa11.35□□□□□ -0.59
MTD1YKR080W TFA1P36100 482 aa11.11□□□□□ -0.63
MTD1YKR080W FAP1P53971 965 aa10.91□□□□□ -0.66
MTD1YKR080W ISW2Q08773 1120 aa10.89□□□□□ -0.67
MTD1YKR080W RSE1Q04693 1361 aaKnown RBP10.84□□□□□ -0.67
MTD1YKR080W RPG1P38249 964 aaKnown RBP10.74□□□□□ -0.69
MTD1YKR080W PRI1P10363 409 aa10.7□□□□□ -0.7
MTD1YKR080W AAD16Q02895 342 aa10.52□□□□□ -0.73
MTD1YKR080W RPL17AP05740 184 aaKnown RBP10.43□□□□□ -0.74
MTD1YKR080W RPL17BP46990 184 aaKnown RBP10.43□□□□□ -0.74
MTD1YKR080W REB1P21538 810 aa10.3□□□□□ -0.76
MTD1YKR080W PRY3P47033 881 aa10.21□□□□□ -0.77
MTD1YKR080W TSR3Q12094 313 aaKnown RBP10.19□□□□□ -0.78
MTD1YKR080W SPT21P35209 758 aa10.03□□□□□ -0.8
MTD1YKR080W RIM101P33400 625 aa9.91□□□□□ -0.82
MTD1YKR080W MRPL32P25348 183 aa9.8□□□□□ -0.84
MTD1YKR080W YKR023WP36119 530 aaKnown RBP9.68□□□□□ -0.86
MTD1YKR080W PTP3P40048 928 aa9.65□□□□□ -0.86
MTD1YKR080W HAA1Q12753 694 aaKnown RBP9.64□□□□□ -0.87
MTD1YKR080W YCK3P39962 524 aa9.62□□□□□ -0.87
MTD1YKR080W OXP1P28273 1286 aa9.61□□□□□ -0.87
MTD1YKR080W RQC2Q12532 1038 aaKnown RBP9.54□□□□□ -0.88
MTD1YKR080W SSP1P38871 571 aa9.52□□□□□ -0.89
MTD1YKR080W HOP09932 586 aa9.51□□□□□ -0.89
MTD1YKR080W YIL055CP40523 627 aaKnown RBP9.5□□□□□ -0.89
MTD1YKR080W YAH1Q12184 172 aaKnown RBP9.5□□□□□ -0.89
MTD1YKR080W TFC8Q12308 588 aa9.5□□□□□ -0.89
MTD1YKR080W CDC27P38042 758 aa9.46□□□□□ -0.9
MTD1YKR080W DCD1P06773 312 aa9.42□□□□□ -0.9
MTD1YKR080W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.39□□□□□ -0.91not detected
MTD1YKR080W YLR271WQ06152 274 aa9.36□□□□□ -0.91
MTD1YKR080W RSM7P47150 247 aa9.34□□□□□ -0.91
MTD1YKR080W BCH2P36122 765 aa9.22□□□□□ -0.93
MTD1YKR080W DMA1P38823 416 aa9.19□□□□□ -0.94
MTD1YKR080W MGA2P40578 1113 aa9.18□□□□□ -0.94
MTD1YKR080W AI2P03876 854 aa9.17□□□□□ -0.94
MTD1YKR080W BBC1P47068 1157 aa9.13□□□□□ -0.95
MTD1YKR080W PSD2P53037 1138 aaKnown RBP9.11□□□□□ -0.95
MTD1YKR080W YGL015CP33199 130 aa9.09□□□□□ -0.95
MTD1YKR080W EPS1P40557 701 aa9.08□□□□□ -0.96
MTD1YKR080W UBP10P53874 792 aaPredicted RBP9.08□□□□□ -0.96
MTD1YKR080W CST9Q06032 482 aa9.08□□□□□ -0.96
MTD1YKR080W SCY1P53009 804 aa9.07□□□□□ -0.96
MTD1YKR080W MAP2P38174 421 aaKnown RBP9.06□□□□□ -0.96
MTD1YKR080W BDF1P35817 686 aa9□□□□□ -0.97
MTD1YKR080W MRM1P25270 412 aa8.9□□□□□ -0.98
MTD1YKR080W SLX5P32828 619 aaKnown RBP8.9□□□□□ -0.98
MTD1YKR080W RTG3P38165 486 aa8.78□□□□□ -1
MTD1YKR080W RAM2P29703 316 aa8.76□□□□□ -1.01
MTD1YKR080W RCR1P38212 213 aa8.76□□□□□ -1.01
MTD1YKR080W TIF4632P39936 914 aaKnown RBP8.72□□□□□ -1.01
MTD1YKR080W VPS29P38759 282 aa8.66□□□□□ -1.02
MTD1YKR080W SAS10Q12136 610 aaPredicted RBP8.65□□□□□ -1.02
MTD1YKR080W MAK11P20484 414 aaKnown RBP8.63□□□□□ -1.03
MTD1YKR080W TGL3P40308 642 aa8.63□□□□□ -1.03
MTD1YKR080W SET1P38827 1080 aaKnown RBP8.61□□□□□ -1.03
MTD1YKR080W YMR1P47147 688 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03not detected
MTD1YKR080W NSR1P27476 414 aaKnown RBP RIP-Chip data8.56□□□□□ -1.04not detected
MTD1YKR080W YOR238WQ08634 303 aa8.56□□□□□ -1.04
MTD1YKR080W STS1P38637 319 aa8.55□□□□□ -1.04
MTD1YKR080W DBP1P24784 617 aaKnown RBP8.54□□□□□ -1.04
MTD1YKR080W YAP5P40574 245 aa8.54□□□□□ -1.04
MTD1YKR080W YFR006WP43590 535 aa8.53□□□□□ -1.04
MTD1YKR080W COQ8P27697 501 aa8.51□□□□□ -1.05
MTD1YKR080W IFH1P39520 1085 aa8.49□□□□□ -1.05
MTD1YKR080W YPR148CQ06523 435 aa8.48□□□□□ -1.05
MTD1YKR080W MIF2P35201 549 aa8.47□□□□□ -1.05
MTD1YKR080W PIB1Q06651 286 aa8.46□□□□□ -1.06
MTD1YKR080W VPS70P47161 811 aa8.45□□□□□ -1.06
MTD1YKR080W NOP53Q12080 455 aaKnown RBP8.43□□□□□ -1.06
MTD1YKR080W EDS1P38073 919 aa8.42□□□□□ -1.06
MTD1YKR080W CKB1P43639 278 aa8.41□□□□□ -1.06
MTD1YKR080W LEU3P08638 886 aa8.4□□□□□ -1.06
MTD1YKR080W VMA1P17255 1071 aaKnown RBP8.38□□□□□ -1.07
MTD1YKR080W MST1P07236 462 aa8.37□□□□□ -1.07
MTD1YKR080W PTC3P34221 468 aaKnown RBP8.36□□□□□ -1.07
MTD1YKR080W SPB4P25808 606 aaPredicted RBP8.34□□□□□ -1.07
MTD1YKR080W LEO1P38439 464 aa8.33□□□□□ -1.08
MTD1YKR080W GTT3P39996 337 aa8.33□□□□□ -1.08
MTD1YKR080W SAM3Q08986 587 aa8.28□□□□□ -1.08
MTD1YKR080W ATH1P48016 1211 aa8.27□□□□□ -1.09
MTD1YKR080W GRE2Q12068 342 aaKnown RBP8.27□□□□□ -1.09
MTD1YKR080W PBS2P08018 668 aa8.25□□□□□ -1.09
MTD1YKR080W REF2P42073 533 aaPredicted RBP8.25□□□□□ -1.09
MTD1YKR080W GYP5Q12344 894 aa8.24□□□□□ -1.09
MTD1YKR080W GUT1P32190 709 aa8.23□□□□□ -1.09
MTD1YKR080W DSF2P38213 736 aa8.23□□□□□ -1.09
MTD1YKR080W YOL036WQ08206 761 aa8.2□□□□□ -1.1
MTD1YKR080W ABP1P15891 592 aaKnown RBP8.17□□□□□ -1.1
MTD1YKR080W RPN1P38764 993 aaKnown RBP8.17□□□□□ -1.1
MTD1YKR080W SET4P42948 560 aa8.17□□□□□ -1.1
MTD1YKR080W WSC3Q12215 556 aa8.16□□□□□ -1.1
MTD1YKR080W MAK21Q12176 1025 aaKnown RBP8.15□□□□□ -1.1
MTD1YKR080W MAM3Q12296 706 aa8.15□□□□□ -1.1
MTD1YKR080W MSB4Q12317 492 aa8.15□□□□□ -1.1
MTD1YKR080W DCW1P36091 449 aa8.14□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms