Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.84■□□□□ 0.93
HTR3AP46098 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTR3AP46098 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HTR3AP46098 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HTR3AP46098 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HTR3AP46098 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HTR3AP46098 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.83■□□□□ 0.93
HTR3AP46098 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HTR3AP46098 RARRES2P1-201ENST00000474487 481 ntBASIC20.83■□□□□ 0.93
HTR3AP46098 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.83■□□□□ 0.93
HTR3AP46098 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.83■□□□□ 0.93
HTR3AP46098 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
HTR3AP46098 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
HTR3AP46098 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.82■□□□□ 0.92
HTR3AP46098 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HTR3AP46098 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
HTR3AP46098 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.82■□□□□ 0.92
HTR3AP46098 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HTR3AP46098 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HTR3AP46098 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HTR3AP46098 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HTR3AP46098 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.82■□□□□ 0.92
HTR3AP46098 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HTR3AP46098 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HTR3AP46098 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.81■□□□□ 0.92
HTR3AP46098 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.81■□□□□ 0.92
HTR3AP46098 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.81■□□□□ 0.92
HTR3AP46098 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HTR3AP46098 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HTR3AP46098 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HTR3AP46098 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.81■□□□□ 0.92
HTR3AP46098 BX664725.1-201ENST00000438252 379 ntBASIC20.81■□□□□ 0.92
HTR3AP46098 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.81■□□□□ 0.92
HTR3AP46098 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HTR3AP46098 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HTR3AP46098 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HTR3AP46098 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTR3AP46098 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTR3AP46098 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTR3AP46098 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HTR3AP46098 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTR3AP46098 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.79■□□□□ 0.92
HTR3AP46098 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.79■□□□□ 0.92
HTR3AP46098 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HTR3AP46098 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HTR3AP46098 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
HTR3AP46098 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HTR3AP46098 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.79■□□□□ 0.92
HTR3AP46098 AC004448.1-201ENST00000458332 883 ntBASIC20.79■□□□□ 0.92
HTR3AP46098 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
HTR3AP46098 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HTR3AP46098 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
HTR3AP46098 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HTR3AP46098 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HTR3AP46098 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HTR3AP46098 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HTR3AP46098 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTR3AP46098 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTR3AP46098 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTR3AP46098 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HTR3AP46098 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.78■□□□□ 0.92
HTR3AP46098 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HTR3AP46098 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTR3AP46098 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.78■□□□□ 0.92
HTR3AP46098 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.78■□□□□ 0.92
HTR3AP46098 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
HTR3AP46098 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HTR3AP46098 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTR3AP46098 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTR3AP46098 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
HTR3AP46098 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HTR3AP46098 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HTR3AP46098 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HTR3AP46098 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.77■□□□□ 0.92
HTR3AP46098 Z92544.1-202ENST00000571933 1220 ntBASIC20.77■□□□□ 0.92
HTR3AP46098 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.77■□□□□ 0.91
HTR3AP46098 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HTR3AP46098 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HTR3AP46098 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HTR3AP46098 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HTR3AP46098 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HTR3AP46098 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HTR3AP46098 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.76■□□□□ 0.91
HTR3AP46098 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.76■□□□□ 0.91
HTR3AP46098 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.76■□□□□ 0.91
HTR3AP46098 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
HTR3AP46098 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.76■□□□□ 0.91
HTR3AP46098 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.76■□□□□ 0.91
HTR3AP46098 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.76■□□□□ 0.91
HTR3AP46098 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.76■□□□□ 0.91
HTR3AP46098 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HTR3AP46098 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
HTR3AP46098 AC021242.3-201ENST00000607598 1377 ntBASIC20.75■□□□□ 0.91
HTR3AP46098 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HTR3AP46098 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
HTR3AP46098 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HTR3AP46098 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
HTR3AP46098 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HTR3AP46098 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HTR3AP46098 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms